Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06996 ATGGAAAAATTTATGAAACATGTGGTAGTAATTCTTTTTGTGTTTTTGAGTGTGCATGATGTGTCTCTGGCAAGAACACAGAAGAGTGAGAATAAGATTACTTACATTGTTCATGTTGCGAAATCCACAATGCCAACAAGCTTCAGCCACCATTCAATCTGGTACAAATCAATTCTGAAGTCGGTATCCCAGTCAGCTGAAGTACTCTATACCTATGATAAGGCAATGCATGGATTCTCAACAAGTTTGAGTGATGAAGAACTTCAGTTACTAAAGAGACAACATGGGATTCTAAAGGTGACACCAGATAAAAAGTACAAACTTCACACAACTCGAACACCGGAGTTTCTCGGGCTTGATAAAATTGCTAGTTTGTTCCCCACGACAAAAAAAAGTAATGATGTAATTGTGGGACTCATAGACTCAGGTGTATGGCCTGAAAGCAAGAGCTTTGATGATACTGGATTTGGGCCCATCCCGCGCAACTGGAAAGGAGAATGTGAAACCGGTACAAATTTTACAACATCTAATTGTAATAAGAAATTGATTGGTGCTAGATTCTTTTCAAAGGGTTTCGAGGCATTTTTGGGTCCAATTAATGAAACCATTCTGTATAGATCACCTCGAGATGATCTAGGCCATGGAACCCACACCGCTAGCACAGTTGCAGGATCTGCGGTGGAAAATGCAAGTCTTTTTGGCTATGCTGATGGAACTGCACGTGGGATGGCAATTGGTGCTAGAGTTGCTGTCTATAAGGTTTGTTGGAAAATTTTCTGTTCAAGTTCTGATATATTGGCTGGGATAGATCAAGCCATTGCTGACAACGTCAACATTGTTTCGGTGTCGCTCGGAGGTCCAGCAGATGATTACTTTAAGAATCACATCGCAATTGGAGCCTTTGCAGCAATGGAACATGGCATTCTAGTCTCATGCTCGGCAGGAAATTCTGGCCCTACTCCTTTCAGAGTAGGTAATGTGGCGCCATGGATTACAACCGTGGGAGCTGGAACACTCGATCGAGATTTCCCTGCATACATCAGTTTAGGAAATGGAAAAAATTATCCAGGTGCATCCCTTTATAAAGGCAATGATTTGCCCGATACTCTTGTGCCAATCATATATGCAGGGAATGCAAGCAACGGTGAAGGAAAAAGTGCTGAGATATGTGATTCAGGTAGCTTGGCTCCGGAAAAAGTTGCAGGAAAGATTGTGTTGTGTGACCGTGGAGTGTTGGCTCCGATATTCCAAGGAGATACTGTGAAATCTGCTGGTGGTTTGGGCATGGTGTTAGCCAACAGTAAGATAGATGGAGAAATACCACTAGCATATGCCCATATTTTGCCAGCAACTTCCGTTAGCTTCACAGATGGCGAAGCTATCAAGAATTACTTGTTTTCTGATCCAAACTCGACAGCTACAATTGTGTTTCAGGGAACCAAGCTAAAGGTTGAGCCATCTCCTGTTGTTGCAGATTTCAGCTCACGAGGCCCGAATTCAGTAACCCCTCAGATATTGAAACCTGATATTATTGCTCCCGGTGTTAACATTATAGCAGCTTATTCAAAAAGTGTGAGTCCTACATTTTTGGCTTCCGATCCTAGGCGCGTAGATTTCAACATTTTATCAGGCACATCCATGGCGTGCCCACACGTAAGTGGACTAGCAGCTCTAATCAAGTCCGTTCATCCAGATTGGAGCCCAGCCATGATTCGATCCGCATTGATGACAACCGCTTATACAACTTACAAAAACAATCAAACATTATTAGACAGTGCAACCAACAAGCCAGCAACTCCATTCGAGTTTGGTGCTGGACATGTTAACCCTATTTCCGCCCTAAATCCCGGACTTGTCTATGATTTAACAACGGATGACTATTTGAGCTTCCTCTGTGCATTGAACTACTCATCTCTTAATATCGAAATTCTAGCGAGGAGAAAGTACACATGCGATCCAAAGAAACAATACAGTGTAACAAATCTTAATTACCCTTCCTTTGCCGTGGTCTTTAAGAGTGAGCATGATGAGATTAAACACACCCGGACTCTTACTAATGTGGGTGCCGCAGGAACATACAAGGTATCTGTTAAGTCAAATGTTGCATCTGTCAAGATCTCAGTTGAACCAGAAGTGTTAAGTTTTAAGAAAAATGAGAAAAAATCATACACAGTTACATTTACTACATCGCGTTCTGAACAAAATAATACTCGAAGTTTTGGAAGTTTAGAATGGTCTCATGGAAAAACTGTTGTTAGAAGTCCTATAGGGTTTAGTTGGAAATTACATTGA 2292 0.4171 MEKFMKHVVVILFVFLSVHDVSLARTQKSENKITYIVHVAKSTMPTSFSHHSIWYKSILKSVSQSAEVLYTYDKAMHGFSTSLSDEELQLLKRQHGILKVTPDKKYKLHTTRTPEFLGLDKIASLFPTTKKSNDVIVGLIDSGVWPESKSFDDTGFGPIPRNWKGECETGTNFTTSNCNKKLIGARFFSKGFEAFLGPINETILYRSPRDDLGHGTHTASTVAGSAVENASLFGYADGTARGMAIGARVAVYKVCWKIFCSSSDILAGIDQAIADNVNIVSVSLGGPADDYFKNHIAIGAFAAMEHGILVSCSAGNSGPTPFRVGNVAPWITTVGAGTLDRDFPAYISLGNGKNYPGASLYKGNDLPDTLVPIIYAGNASNGEGKSAEICDSGSLAPEKVAGKIVLCDRGVLAPIFQGDTVKSAGGLGMVLANSKIDGEIPLAYAHILPATSVSFTDGEAIKNYLFSDPNSTATIVFQGTKLKVEPSPVVADFSSRGPNSVTPQILKPDIIAPGVNIIAAYSKSVSPTFLASDPRRVDFNILSGTSMACPHVSGLAALIKSVHPDWSPAMIRSALMTTAYTTYKNNQTLLDSATNKPATPFEFGAGHVNPISALNPGLVYDLTTDDYLSFLCALNYSSLNIEILARRKYTCDPKKQYSVTNLNYPSFAVVFKSEHDEIKHTRTLTNVGAAGTYKVSVKSNVASVKISVEPEVLSFKKNEKKSYTVTFTTSRSEQNNTRSFGSLEWSHGKTVVRSPIGFSWKLH 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06996 763 FunFam Subtilisin-like protease SBT1.5 134 362 - -
Vifa1g06996 763 FunFam Subtilisin-like protease SBT1.9 23 109 - -
Vifa1g06996 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 109 IPR037045 -
Vifa1g06996 763 CDD PA_subtilisin_like 346 475 - -
Vifa1g06996 763 Pfam Fibronectin type-III domain 661 756 IPR041469 -
Vifa1g06996 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Vifa1g06996 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 756 IPR045051 -
Vifa1g06996 763 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Vifa1g06996 763 SUPERFAMILY Subtilisin-like 108 618 IPR036852 GO:0004252|GO:0006508
Vifa1g06996 763 Pfam Subtilase family 133 606 IPR000209 GO:0006508|GO:0008236
Vifa1g06996 763 FunFam subtilisin-like protease SBT1.5 340 482 - -
Vifa1g06996 763 Pfam PA domain 380 461 IPR003137 -
Vifa1g06996 763 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vifa1g06996 763 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vifa1g06996 763 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Vifa1g06996 763 Gene3D - 631 760 - -
Vifa1g06996 763 Gene3D - 340 483 - -
Vifa1g06996 763 ProSiteProfiles Serine proteases, subtilase domain profile. 116 614 - -
Vifa1g06996 763 Gene3D Peptidase S8/S53 domain 134 627 IPR036852 GO:0004252|GO:0006508
Vifa1g06996 763 CDD Peptidases_S8_3 106 580 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06996 Vifa-Chr1 1081646040 1081648331 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06996 4 760 Subtilisin-like Serine Gene Family AT5G67360 63.109 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06996 - - gmx:100815413 1030.39