Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06994 ATGAAACATGTGGTAGTAATTCTTTTTGTGTTTTTGAGTGTGCATGATGTGTCTCTGGCAAGAACACAGAAGAGTGAGAATAAGATTACTTACATTGTTCATGTTGCGAAATCCACAATGCCAACAAGCTTCAGCCACCATTCAATCTGGTACAAATCAATTCTGAAGTCGGTATCCCAGTCAGCTGAAGTACTCTATACCTATGATAAGGCAATGCATGGATTCTCAACAAGTTTGAGTGATGAAGAACTTCAGTTACTAAAGAGACAACATGGGATTCTAAAGGTGACACCAGATAAAAAGTACAAACTTCACACAACTCGAACACCGGAGTTTCTCGGGCTTGATAAAATTGCTAGTTTGTTCCCCACGACAAAAAAAAGTAATGATGTAATTGTGGGACTCATAGACTCAGGTGTATGGCCTGAAAGCAAGAGCTTTGATGATACTGGATTTGGGCCCATCCCGCGCAACTGGAAAGGAGAATGTGAAACCGGTACAAATTTTACAACATCTAATTGTAATAAGAAATTGATTGGTGCTAGATTCTTTTCAAAGGGTTTCGAGGCATTTTTGGGTCCAATTAATGAAACCATTCTGTATAGATCACCTCGAGATGATCTAGGCCATGGAACCCACACCGCTAGCACAGTTGCAGGATCTGCGGTGGAAAATGCAAGTCTTTTTGGCTATGCTGATGGAACTGCACGTGGGATGGCAATTGGTGCTAGAGTTGCTGTCTATAAGGTTTGTTGGAAAATTTTCTGTTCAAGTTCTGATATATTGGCTGGGATAGATCAAGCCATTGCTGACAACGTCAACATTGTTTCGGTGTCGCTCGGAGGTCCAGCAGATGATTACTTTAAGAATCACATCGCAATTGGAGCCTTTGCAGCAATGGAACATGGCATTCTAGTCTCATGCTCGGCAGGAAATTCTGGCCCTACTCCTTTCAGAGTAGGTAATGTGGCGCCATGGATTACAACCGTGGGAGCTGGAACACTCGATCGAGATTTCCCTGCATACATCAGTTTAGGAAATGGAAAAAATTATCCAGGTGCATCCCTTTATAAAGGCAATGATTTGCCCGATACTCTTGTGCCAATCATATATGCAGGGAATGCAAGCAACGGTGAAGGAAAAAGTGCTGAGATATGTGATTCAGGTAGCTTGGCTCCGGAAAAAGTTGCAGGAAAGATTGTGTTGTGTGACCGTGGAGTGTTGCCTCCGATATTCCAAGGAGATACTGTGAAATCTGCTGGTGGTTTGGGCATGGTGTTAGCCAACAGTAAGATAGATGGAGAAATACCACTAGCATATGCCCATATTTTGCCAGCAACTTCCGTTAGCTTCACAGATGGCGAAGCTATCAAGAATTACTTGTTTTCTGATCCAAACTCGACAGCTACAATTGTGTTTCAGGGAACCAAGCTAAAGGTTGAGCCATCTCCTGTTGTTGCAGATTTCAGCTCACGAGGCCCGAATTCAGTAACCCCTCAGATATTGAAACCTGATATTATTGCTCCCGGTGTTAACATTATAGCAGCTTATTCAAAAAGTGTGAGTCCTACATTTTTGGCTTCCGATCCTAGGCGCGTAGATTTCAACATTTTATCAGGCACATCCATGGCGTGCCCACACGTAAGTGGACTAGCAGCTCTAATCAAGTCCGTTCATCCAGATTGGAGCCCAGCCATGATTCGATCCGCATTGATGACAACCGCTTATACAACTTACAAAAACAATCAAACATTATTAGACAGTGCAACCAACAAGCCTGCAACTCCATTCGAGTTTGGTGCTGGACATGTTAACCCTATTTCCGCCCTAAATCCCGGACTTGTCTATGATTTAACAACGGATGACTATTTGAGCTTCCTCTGTGCATTGAACTACTCATCTCTTAATATCGAAATTCTAGCGAGGAGAAAGTACACATGCGATCCAAAGAAACAATACAGTGTAACAAACCTTAATTACCCTTCCTTTGCCGTGGTCTTTAAGAGTGAGCATGATGAGATTAAACACACCCGGACTCTTACTAATGTGGGTGCCGCAGGAACATACAAGGTATTTGTTAAGTCAAATGTTGCATCTGTCAAGATCTCAGTTGAACCAGAAGTGTTAAATTTTAAGAAAAATGAGAAAAAATCATACACAGTTACATTTACTACATCGCGTTCTGAACAAAATAATACTCGAAGTTTTGGAAGTTTAGAATGGTCTCATGGAAAAACTGTTGTTAGAAGTCCTATAGGGTTTAGTTGGAAATTACATTGA 2280 0.418 MKHVVVILFVFLSVHDVSLARTQKSENKITYIVHVAKSTMPTSFSHHSIWYKSILKSVSQSAEVLYTYDKAMHGFSTSLSDEELQLLKRQHGILKVTPDKKYKLHTTRTPEFLGLDKIASLFPTTKKSNDVIVGLIDSGVWPESKSFDDTGFGPIPRNWKGECETGTNFTTSNCNKKLIGARFFSKGFEAFLGPINETILYRSPRDDLGHGTHTASTVAGSAVENASLFGYADGTARGMAIGARVAVYKVCWKIFCSSSDILAGIDQAIADNVNIVSVSLGGPADDYFKNHIAIGAFAAMEHGILVSCSAGNSGPTPFRVGNVAPWITTVGAGTLDRDFPAYISLGNGKNYPGASLYKGNDLPDTLVPIIYAGNASNGEGKSAEICDSGSLAPEKVAGKIVLCDRGVLPPIFQGDTVKSAGGLGMVLANSKIDGEIPLAYAHILPATSVSFTDGEAIKNYLFSDPNSTATIVFQGTKLKVEPSPVVADFSSRGPNSVTPQILKPDIIAPGVNIIAAYSKSVSPTFLASDPRRVDFNILSGTSMACPHVSGLAALIKSVHPDWSPAMIRSALMTTAYTTYKNNQTLLDSATNKPATPFEFGAGHVNPISALNPGLVYDLTTDDYLSFLCALNYSSLNIEILARRKYTCDPKKQYSVTNLNYPSFAVVFKSEHDEIKHTRTLTNVGAAGTYKVFVKSNVASVKISVEPEVLNFKKNEKKSYTVTFTTSRSEQNNTRSFGSLEWSHGKTVVRSPIGFSWKLH 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06994 759 Gene3D - 627 756 - -
Vifa1g06994 759 Gene3D - 336 479 - -
Vifa1g06994 759 CDD PA_subtilisin_like 342 471 - -
Vifa1g06994 759 Gene3D Peptidase S8/S53 domain 130 623 IPR036852 GO:0004252|GO:0006508
Vifa1g06994 759 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Vifa1g06994 759 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Vifa1g06994 759 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Vifa1g06994 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 752 IPR045051 -
Vifa1g06994 759 Pfam Peptidase inhibitor I9 30 105 IPR010259 -
Vifa1g06994 759 SUPERFAMILY Subtilisin-like 104 614 IPR036852 GO:0004252|GO:0006508
Vifa1g06994 759 Pfam PA domain 376 457 IPR003137 -
Vifa1g06994 759 ProSiteProfiles Serine proteases, subtilase domain profile. 112 610 - -
Vifa1g06994 759 FunFam subtilisin-like protease SBT1.5 336 478 - -
Vifa1g06994 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 105 IPR037045 -
Vifa1g06994 759 Pfam Fibronectin type-III domain 657 752 IPR041469 -
Vifa1g06994 759 FunFam Subtilisin-like protease SBT1.5 130 358 - -
Vifa1g06994 759 CDD Peptidases_S8_3 102 576 IPR034197 -
Vifa1g06994 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Vifa1g06994 759 FunFam Subtilisin-like protease SBT1.9 19 105 - -
Vifa1g06994 759 Pfam Subtilase family 129 602 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06994 Vifa-Chr1 1081538307 1081540586 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06994 22 756 Subtilisin-like Serine Gene Family AT5G67360 64.315 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06994 - - gmx:100815413 1024.62