Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06975 ATGGAACTTAAGCTTTCCTCCTTTGTTATTCCCTTTTCTCTTTTATTAATGTTTCATTTACTTGCAAAATACTACAAACAAAAAACTGCTTACAAGTTACCTCCTGGTCCAATGAAGTTACCAATCATTGGTAACCTTCATCAAATAGCAGCCCTAGGATCACTTCCACATCGTGTTTTTCAACAACTTGCGCATAAATATGGTCCTATTGTTCACCTAAAACTTGGTGAAATTTCTACCGTAGTTATAACCTCACCAAAGTTAGCAAAAGAAATATTAAAAACTCATGATGTTGTTTTTGCTAATAGGCCACATCTGCAATCATCTCATATCATGTCATATGGTTCAAAAGATATTGCATTTTCTCCATATAATGATTATTGGAAACAAATGAGAAAAATATGTATATTAGAGCTTTTAAGTATCAAAAGAGTTCAAACTTTTGCTTATATTAGAGAAGACGAGACCCGAAACTTTATAAGATCAATTCACTCATCAGAAGGGTCGCCAGTCAATCTCACCCATAGAATTTTCTCATTAGTGAGTTCTATGGTTTCGAGATCGGCTTTTGGCGACAAAACAGAAGATCAAGAAGAGTTTGTGCATGTGATAAGAAAAGCTATAGAATATGTTGGAGGACTTGAACTTGCAGACTTGTTTCCTTCAAAGAAGTCTATAATAAATATGCTATCCGGCGCGAAATCAAAGTCGGAAAAAATGCACAAAAATTCTGACAAAATAATGGAAATAATTGTTAAGAAGCATCAAGAGAAGCAAAAAAGAGCAAAAGAAGGGAAGATTAAAAATGATGAAGAAGAGCATGAAGATCTTGTTGATGTTCTTTTGAGAATCCAAGAAGATGGAAGGAGTAAGGATCTTCGTCGAGAAGCCCAACACAAAGTATCGCCTCGAGGGGAGGCAAGGACCTTCATCGAGAAGTATATCACAAAGTATCGCCTCGAGAGGGTAGCAAGGTCCTACTTCGAGAAGTTCATCACAAAGTATCATTTCGAGGGGTGGCAAGGACATTCGTTGAGAATTCTAGCATTTGCACCGCCTTGA 1062 0.3663 MELKLSSFVIPFSLLLMFHLLAKYYKQKTAYKLPPGPMKLPIIGNLHQIAALGSLPHRVFQQLAHKYGPIVHLKLGEISTVVITSPKLAKEILKTHDVVFANRPHLQSSHIMSYGSKDIAFSPYNDYWKQMRKICILELLSIKRVQTFAYIREDETRNFIRSIHSSEGSPVNLTHRIFSLVSSMVSRSAFGDKTEDQEEFVHVIRKAIEYVGGLELADLFPSKKSIINMLSGAKSKSEKMHKNSDKIMEIIVKKHQEKQKRAKEGKIKNDEEEHEDLVDVLLRIQEDGRSKDLRREAQHKVSPRGEARTFIEKYITKYRLERVARSYFEKFITKYHFEGWQGHSLRILAFAPP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06975 353 Gene3D Cytochrome P450 26 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06975 353 Coils Coil 253 287 - -
Vifa1g06975 353 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 289 - -
Vifa1g06975 353 SUPERFAMILY Cytochrome P450 34 289 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06975 353 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06975 353 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06975 353 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06975 353 Pfam Cytochrome P450 34 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06975 Vifa-Chr1 1076968422 1076969894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06975 8 287 Cytochrome P450 AT3G26310 36.364 3.47e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06975 - - gmx:100785715 335.109