Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06939 ATGACTGGAAAAGCGAAACCAAAGAAGCACACGGCGAAGGAGATCCAAGCTAAGGTGGATGCCGCGCTGACCAACTGCGGCGGAGGAAAAGCCGGTTTGCTTGATCGGATCGGTATTCATCACGATGCTCGTCATCCAAAGATCCCCTTTGAGGAAGACAAGCTTATGAATCGTCATGCAACTGCGGCTGCTGTTCCGGAATCTTCCAAGCCTCGCCCTGGTGTTCGTGGTAGCCTCAAAAAAGTGATCGTTGAATCAAAAGGTGGACGAGCCGAAGAAGTCAAGAAAGACTACCTTGCTACTCCCATTGCACCTAACGTTTCTCTGGCCCGCCAGCATTTCAACAATGATTCTGAAGCTGCCATCAATGAACAGATTAATGGACTTGCTAAGTTCTTTAAGGAATCTAGTGAAGAGGAAAGAGAGCATGCTGAGAAGCGTATGAAGTATCAGAATCTTCGTGGTGGAAGCGCGGTGGTCAGCTTCTGGCATGGATGA 498 0.49 MTGKAKPKKHTAKEIQAKVDAALTNCGGGKAGLLDRIGIHHDARHPKIPFEEDKLMNRHATAAAVPESSKPRPGVRGSLKKVIVESKGGRAEEVKKDYLATPIAPNVSLARQHFNNDSEAAINEQINGLAKFFKESSEEEREHAEKRMKYQNLRGGSAVVSFWHG 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06939 165 ProSiteProfiles Ferritin-like diiron domain profile. 89 165 IPR009040 -
Vifa1g06939 165 Gene3D - 107 162 IPR012347 -
Vifa1g06939 165 Pfam Ferritin-like domain 123 160 IPR008331 GO:0008199
Vifa1g06939 165 PANTHER FERRITIN 128 159 IPR001519 GO:0006826|GO:0006879|GO:0008199
Vifa1g06939 165 SUPERFAMILY Ferritin-like 102 160 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06939 Vifa-Chr1 1071047424 1071048169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06939 1 81 C2H2 Transcription Factor Family AT3G02790 56.604 8.14e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06939 - - gmx:100784149 126.331