Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06913 ATGTCCAGCGAGACTCAGGCTGAAATTCTGGATGGAGTACTCAATGTAGTACCTAAATTTGGCGCAACTACAGGAGCTGCAATAAGCTCACATATGGATATTGATGCGGTAACTTGTTTTACTGGTTCAATCGAAATAGGTCGTCATGTAATACAGGCGGATGCATTAAGAAATTTGAAGCTGGTATCGCTTAAGTTAGGAGGCAAGTCACCTATCTTAGTTTTTGATGATGCTGATGTTGATAAAGCTTTTGATCTTGCTCTATTTGGAATCCTTCATAATAAAGGTGAAGTGTGCGTTGCATTTTCAAGAGTTTTTGTTCAAGAAAAAATTTATGATGAGTTTGAAACGAAAGTAGTGGAAAAGGTGAAAATTTGGGTAGTTGGTGACCCTTTTGATCCTCAAGTTCAACAAGGACCCCAACATGCTCTAAGCTAG 438 0.3881 MSSETQAEILDGVLNVVPKFGATTGAAISSHMDIDAVTCFTGSIEIGRHVIQADALRNLKLVSLKLGGKSPILVFDDADVDKAFDLALFGILHNKGEVCVAFSRVFVQEKIYDEFETKVVEKVKIWVVGDPFDPQVQQGPQHALS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06913 145 Pfam Aldehyde dehydrogenase family 7 141 IPR015590 GO:0016491
Vifa1g06913 145 SUPERFAMILY ALDH-like 7 141 IPR016161 GO:0016491
Vifa1g06913 145 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 6 67 IPR016162 GO:0016491
Vifa1g06913 145 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 68 142 IPR016163 GO:0016620
Vifa1g06913 145 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 92 103 IPR016160 GO:0016491
Vifa1g06913 145 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06913 Vifa-Chr1 1065198615 1065202966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06913 6 141 Aldehyde Dehydrogenase Gene Family AT3G24503 64.706 1.68e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06913 K12355 - gmx:100784449 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06913 1 1065198615 1065202966 Vifa1g06913 1 1065198615 1065202966 PCT