Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06894 ATGCCACTAGACTTTCACCTATACATGTTTTTTGCACTTTACTCAGTTGAACTCACAGGACGTGCGGCTACAGTCGTCGTTGCTCATATAGAGAATCTTAATAGCCAACCCGGAGCACAAAATCTTACAAGAACCCAGGAAGAGCTAGAAAACATTAAGAACACCTTTGAAGAATTTGGATATGCACATGATGCTATCAAAGTTCAAACCTTAAATGTCGTGTCAGCCTATGCAACCGTTCACGAGGACATATATAACACGGCTAATGAAAAGCGCACAAGCTTGATTATCCTTCCATTCCACAAACAACTAAGTTCAGAAGGAGTACTTGAAACAACCAATGCCACATACAAAGATATAAACATGAATGTGATGCAAAGTGCACCTTGCTCTGTGGGAATCTATGTTGACTGTGATCTTGGGTCATTACCGAAAATGAACTTTCATATTCTTATGATTTTTGTTGGAGGTCTTGACGACCGTGAAGCGTTAGTTGTTGTATAG 504 0.3988 MPLDFHLYMFFALYSVELTGRAATVVVAHIENLNSQPGAQNLTRTQEELENIKNTFEEFGYAHDAIKVQTLNVVSAYATVHEDIYNTANEKRTSLIILPFHKQLSSEGVLETTNATYKDINMNVMQSAPCSVGIYVDCDLGSLPKMNFHILMIFVGGLDDREALVVV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06894 167 PANTHER CATION/H + ANTIPORTER 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06894 Vifa-Chr1 1062335250 1062335753 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06894 11 164 Antiporter Super Family AT2G13620 40.252 8.15e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06894 - K26731 gmx:100800072 234.187