LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g06890	ATGCAAAGTGCACCTTGCTCTGTGGGAATCTATGTTGATCGTGATCTTAGGTCATTACCGAAAATGAACTTTCGTATTCTTATGATTTTTGTTGGAGGTCCTGACGACCGTGAAGCTTTAGCTGTTGCATGGAGGATGGCGGGGCACCCAGGAACCCGATTATCAGTAGTTCGGATGCTCCTGTTTGATGAAGCTGCAGAAGTAGACACCTCAAGTCATGCTGAAGTACAAGGCATACTATTTGTTGTAATGGATTGTGAGAAGCAGAAGGAGTTAGATGATGAGTGTGTTAATTCATTTAGACTGACAGCGGTAAATAACAACGATTCTATAACCTATTCAGAGATTGGTGTCCATTCAGGCGAAGATATTCCCACAGTCCTCAATGAGCTAGACAAATTTCGTTGTGATTTATACATAGTTGGACAGGGGAATAGTAGAAACTCTCGGGTCTTTTCTAGTTTATTGGAATGGTCGGACTGTCTAGAACTTGGAGTTATAGGGGATATTTTAGCATCAAACAATTTTGGTTCAGGCTCATCTGTGCTAGTTGTGCAACAATATGGGTATGGAGGAATGGTTTTGGGAAAGCAATCCAACAATGTGACCACTAACAACGATGGTTTTAAGTCACTTGTCGTGAAGACAAAATAA	654	0.4128	MQSAPCSVGIYVDRDLRSLPKMNFRILMIFVGGPDDREALAVAWRMAGHPGTRLSVVRMLLFDEAAEVDTSSHAEVQGILFVVMDCEKQKELDDECVNSFRLTAVNNNDSITYSEIGVHSGEDIPTVLNELDKFRCDLYIVGQGNSRNSRVFSSLLEWSDCLELGVIGDILASNNFGSGSSVLVVQQYGYGGMVLGKQSNNVTTNNDGFKSLVVKTK	217

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g06890	217	PANTHER	CATION/H + ANTIPORTER	1	188	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g06890	Vifa-Chr1	1062116888	1062117541	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g06890	1	188	Antiporter Super Family	AT2G13620	42.784	1.55e-42	150

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g06890	-		-	gmx:100800072	346.665