Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06875 ATGTCGCCATTTGCATGTTATACTATGAATCTGGTTAATCCAAATAGAATATGGCAAACTGATAATGTCTTAAAAAAGGAGCTTCCCATTCTCGCCTTTCAAGTCGGTTTTGTCGTCCTGATTTCTCGTCTCTTCTTCTTTATATATAGACCTCTTCATCTACCTCGTATCTTGTCTCAACTCTCCGTTGGTTTTCTACTAACTCCGCCATTAATTGGGAATTACACAGAGGTTTTCACATTCTTTTTTCCGATAACCGGTGTTCTTAACGTTGAAGTTCTATCGCATATTGGTATAATCTATTATGCATTTCTCAGTGGTTTGGAGATGAACTTGAATGTCGTTTTACATGTTAAGAAGAAAGCCGGGAGCATTGCGATTGCCGGGATAGTTTTTCCAATGGTGATGGGACCGCTTTTATATAATCTACACAGAAGAACTTATAACAAAGGTGATGGGGTGGAACTTGAAGAGAATGCAGTACATGCTAATGTGGTATGGACTTTAGTTCTTACTGTAACTGGTTTTCCTGTTATCGCTCATTCTCTTTCTGAGTTGAAGCTTCTGTATACTGGTCTTGGTGAAGCTGCATTAACAGCTTCTATGGTCAGTGACACATATGCATGGGTCTTATTCACACTCTTTGTTCCAATTTCGATTAATGGTACAAGAGCAATATACTCGGTGTTGAGTACAATAATATTTATTTTCATTTGCATCTTCATTGTGCGTCCTATCATTGTTAAAGTCATTGATGGCATGACGGAAAGAGACGAATGGGATGATAGCAACTTGCTTTATGTGGTTATGGGACTTTTGGTTTGTTCAAACATAACAGATATGCTTGGTACGCAGGCTGTTGTTGGTGCCTTTGTGTATGGATTGATTTTGCCTCATGGGAAATTCGCTGACAAAGTGGTGTCAATCTCAGATGATTTTGGTAGGGGTTTTCTCGCGCCGCTGTTCTTTAGTGGCACAGGAATGAGACTCATGGTTATCGCCCTTTTCTATCAGGATAACATGTTTTTGACATTTATTGTTATAATCTTGCTGTGTTCTATAAAGGTTCTAGGCACTATCTTTGCAGCTTTCTTCTTTGGCATGCGTACTCGTGACAGTTTCGCTCTAGGCTTGATTCTCAATACCAAAGGCGCTATTGCACTAATAATGCTCAACATTGCTTGGGATCGAACGATTCTTTCTGTACCAACCTATGTTGTTCTATCATCTTCAGTTCTTCTAATGACTATAGTGGTGTCTCCTATCATCAATGTAATTTACAAGCCTAGAAAGAGATTTGAGCAAAACAAGTTGAAAACCATACAAAAGCTAAGAAATGATGCAGAACTCAGAATTCTAGCATGTGTTCACAATACTCGACAAGCCACAGGGATTATAAGCCTAATTGAATTATTCAATGTCACTAGACTCTCACCATTACATGTTTTCGGACTTCATCTTGTCGAACTCACAAGAAGCGCAGCAGCACTTGTTGCTGCCCATATGGAGAAACCAAGTGGCCAACCAGGAGCACAAAATCTCACACAATCTCAAGTAGAACAAGAAGGTATTAACAGCACGTTCGAATCATTCGGAGAATCATATGATGCTATAAGAGTCCAAACATTAAACGTCGTCTCCGCTTTCGAAACCATTCACCAAGATATATACAATTCAGCTAACGAAAAACACACGAGCCTGATCATCATTCCTTTTCACAAACAGTTAAGCTCAGAAGGCGCACTCGAAACAGCCAGTGTCGTGTATAGAGACATAAACATGAATGTATTGCAAAGTGCACCTTGTTCAGTAGGAATATTCGTCGATCGTGATATCGGTTCAATATCAAAACTAAACTTCTGCATTCGTATGATCTTTGTTGGTGGACCGGATGACCGCGAAGCGATCGCGGTTGCATGGAGGATGGCAGGTCATCCAGGAATCAATCTATCAGTAGTAAGAATGCTTCTGTTTGATGATGCTGCGGCAGTGGACACATCAATTCAGGTTGAATCACAAGGTATATTAGCAGCAGTAATGGATAACGAGAAACAAAAGGAGTTAGACGACGAATACATGAATTCGTTTAGACTAACGGCAGTGAACAGTGATGATTCTATAACATATTCAGAGATTGATGTTCATTCGGCCGAAGATATTCCGAAAATACTTAACGAGATAGATTCGTATGGTTGTGATTTGTATATAGTTGGACAAGGAAATTGTAGAAACTCTCAAGTGTTTTCGGATATGTTGGAATGGTGTGATTGTTCGGAACTTGGAGTTATAGGAGATATTTTAGGGTCGAATAATTCTGGTTCACGTTCTTCTGTATTGGTTGTGCAACAATATGGATATGGAGGAATGGTTTTAGGAAAACAGTCTAATAATGTGACTACTAATGATGATGGTAGTAAAACACTTGTTGTGAAATCAGAATGA 2442 0.3927 MSPFACYTMNLVNPNRIWQTDNVLKKELPILAFQVGFVVLISRLFFFIYRPLHLPRILSQLSVGFLLTPPLIGNYTEVFTFFFPITGVLNVEVLSHIGIIYYAFLSGLEMNLNVVLHVKKKAGSIAIAGIVFPMVMGPLLYNLHRRTYNKGDGVELEENAVHANVVWTLVLTVTGFPVIAHSLSELKLLYTGLGEAALTASMVSDTYAWVLFTLFVPISINGTRAIYSVLSTIIFIFICIFIVRPIIVKVIDGMTERDEWDDSNLLYVVMGLLVCSNITDMLGTQAVVGAFVYGLILPHGKFADKVVSISDDFGRGFLAPLFFSGTGMRLMVIALFYQDNMFLTFIVIILLCSIKVLGTIFAAFFFGMRTRDSFALGLILNTKGAIALIMLNIAWDRTILSVPTYVVLSSSVLLMTIVVSPIINVIYKPRKRFEQNKLKTIQKLRNDAELRILACVHNTRQATGIISLIELFNVTRLSPLHVFGLHLVELTRSAAALVAAHMEKPSGQPGAQNLTQSQVEQEGINSTFESFGESYDAIRVQTLNVVSAFETIHQDIYNSANEKHTSLIIIPFHKQLSSEGALETASVVYRDINMNVLQSAPCSVGIFVDRDIGSISKLNFCIRMIFVGGPDDREAIAVAWRMAGHPGINLSVVRMLLFDDAAAVDTSIQVESQGILAAVMDNEKQKELDDEYMNSFRLTAVNSDDSITYSEIDVHSAEDIPKILNEIDSYGCDLYIVGQGNCRNSQVFSDMLEWCDCSELGVIGDILGSNNSGSRSSVLVVQQYGYGGMVLGKQSNNVTTNDDGSKTLVVKSE 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06875 813 Gene3D - 30 437 IPR038770 -
Vifa1g06875 813 PANTHER CATION/H + ANTIPORTER 6 784 - -
Vifa1g06875 813 Pfam Sodium/hydrogen exchanger family 37 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06875 Vifa-Chr1 1059670629 1059673743 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06875 6 784 Antiporter Super Family AT2G13620 37.009 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06875 - - gmx:100804266 1186.02