Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06798 ATGAAGGACGAAGAATTGCTTATACAAAACGGATCAGGATCAGAAGAAAAATATAATCACATGTGTCAGTGTCGTAATAGTGATGATACTGGTAACGTTTTTAAAAAGAAGTGTCGGTGTTACAGAGATTTTCACAAACACAATCATCAGATTACTATATCTGATGTCGTGTTTAAGCATAGATGGAGTAGTGTTAGTTCTTCGGATCTTATGTTTTTGAATTCGGAGATGATTAATGCTACCTCAAGTAATAGATTCAACAAGATGGAATCAAATTTTAATGATGTGAAACATGATGATGGTGAGAGAAGATCAGTTTCAGAAATCATTGGTGTTTCTAGATTTAGAGAATTTGATACGAAGAAAAGGGTGTTTGGAGATTCTTCATTGGTTGAAAATGATGTTAAAGAGGAAAGAATGAGGAAGCTTTGGTTTCCAATTGCAAGAAGAACAGCTGAATGGTTTGTGAATAGAGAAAAAAGTTCTCAACAAAAATCATTTTTAGATGTATAA 513 0.3294 MKDEELLIQNGSGSEEKYNHMCQCRNSDDTGNVFKKKCRCYRDFHKHNHQITISDVVFKHRWSSVSSSDLMFLNSEMINATSSNRFNKMESNFNDVKHDDGERRSVSEIIGVSRFREFDTKKRVFGDSSLVENDVKEERMRKLWFPIARRTAEWFVNREKSSQQKSFLDV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06798 170 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 22 160 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06798 44 161 C3H Transcription Factor Family AT2G20030 47.407 2.56e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06798 K10664 - gmx:100806950 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06798 1 1048752988 1048753500 Vifa1g06798 1 1048752988 1048753500 ECH