Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06703 ATGGTGTCTGAAAGAGCTAAGCTTCACACAGCCTTAACTTTTTTACAATTCTGTCATGCAGGAAATCATATATTTCTCAGAATTGCACTCAATACTGGTGTCAGCAAGCTTGTTTTTCCTGTTTATAGAAACATCACTGCTTTCATTCTTCTAGCTCCACTTGCATATTTCACTGAAAAGAAAGATAGGCCACCAATAACCAGTTATTGTTTGTTACAGTTTTTCCTACTTGGACTTGTTGGAATAACTATGAAAGAAGGATTTTACCTTGTTGGTTTGGACAATACATCGCCAACATTTGCTTCTGCTATGCAAAATTCTGTTCCCGCCCTTACATTTCTGATGGCTGTGATTCTAAGATATGAGAGCTTGCGCTTAAATAGGATCAATGGTATAGCTAAGGTTCTTGGAGTAGTTGCTTCTGTTGGAGGATTTCAATGGGAAAAACTTGAGCTTGGGTGGCATATTTCTCTTTGGTCACTGTTTGAGTTGTTTGGAACAATAGCAGCATTTCTTGAGAAGGATCCCAAAGCTTGGCAGCTCAATTCCATTGACGAAGCTTATAGTATTTTATACTCGGGAGTGGTGATTTCAGGTGTGGCAGCAGCAATACAAATATGGACTATTAGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACATTACTTGTAGCTTTGATAGCATCCATTGCTTTTGGTGAAGAATTTTTCTTGGGAGGGATCGTTGGAGCTATCTTAATTATAACCGGTTTATACCTTGTTGTATGGGGAAGAAGTCAAGAAACCAAGTCTGATGAGCCTGAGAATCGTATGGAAGAAAAAATTGATAATTCTTACCTCATCCAACCATTGATTTCTGTGCACAACTCTTAG 885 0.3887 MVSERAKLHTALTFLQFCHAGNHIFLRIALNTGVSKLVFPVYRNITAFILLAPLAYFTEKKDRPPITSYCLLQFFLLGLVGITMKEGFYLVGLDNTSPTFASAMQNSVPALTFLMAVILRYESLRLNRINGIAKVLGVVASVGGFQWEKLELGWHISLWSLFELFGTIAAFLEKDPKAWQLNSIDEAYSILYSGVVISGVAAAIQIWTISKGGPVLASIYLPLQTLLVALIASIAFGEEFFLGGIVGAILIITGLYLVVWGRSQETKSDEPENRMEEKIDNSYLIQPLISVHNS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06703 294 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 140 - -
Vifa1g06703 294 PANTHER WAT1-RELATED PROTEIN 157 270 IPR030184 GO:0016020|GO:0022857
Vifa1g06703 294 Pfam EamA-like transporter family 17 137 IPR000620 GO:0016020
Vifa1g06703 294 Pfam EamA-like transporter family 168 259 IPR000620 GO:0016020
Vifa1g06703 294 SUPERFAMILY Multidrug resistance efflux transporter EmrE 186 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06703 Vifa-Chr1 1039412088 1039413923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06703 1 294 Nodulin-like Gene Family AT3G18200 42.330 2.12e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06703 - - psat:127120200 481.485