Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06667 ATGGCCGCTGAGCTCCGTCGCCTCTGCGATGTACACTTCGATTCCTCGATCATCGGCGTCGGCGAAGTTGCCAAAGCTATCATCTGTATGGAGATTGCAGCAACGAGGCTAGGTGTTCTCTTTGATCGATCTTCAGCAGTGAAACTCAGTGGAATGTCTGAGAGAGCTTATATCAGATCTTACAATTCACTTCACAATGGCATTGGTGTCAAGTTGAAGCTTGATGTGAGAGAATTGGCTATTCGATTTGGTTGTGTGAGGATTATACCTTATGTTCGCGACGGTCTCAAGCTTTATAAGGATATGTTTCTTGCTTCGTTGCTTGCTGCTCGCCGTGCTAGTGCTGATTTTACTCGTCCGATGTTCATGGTTGTTGCTTTTTATTTATCTGCAAAGAAACAAAAGCTTAAAGTTGATAAGACTAAGCTAATTTAA 435 0.4322 MAAELRRLCDVHFDSSIIGVGEVAKAIICMEIAATRLGVLFDRSSAVKLSGMSERAYIRSYNSLHNGIGVKLKLDVRELAIRFGCVRIIPYVRDGLKLYKDMFLASLLAARRASADFTRPMFMVVAFYLSAKKQKLKVDKTKLI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06667 144 Pfam Origin recognition complex subunit 6 (ORC6) 2 71 IPR008721 GO:0003677|GO:0005664|GO:0006260
Vifa1g06667 144 CDD Orc6_mid 73 144 - -
Vifa1g06667 144 Gene3D - 72 144 - -
Vifa1g06667 144 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 2 144 IPR020529 GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06667 Vifa-Chr1 1033784202 1033786144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06667 2 144 Core DNA Replication Machinery Family AT1G26840 70.629 6.13e-71 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06667 K02608 - gmx:100777539 218.779