Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06648 ATGGTATTGCTAATTGCACTCGCATTGCTTCTTGGTGTTGTCATTGTTTTTCTTCTTTTCAACCCAAGGCACCAAAAATATGGACAAAAGGGAAAAGCTGTTTCCACCTCAAACGATGATAAGACATCAAAATCCTATAGTAAAAATGAAGTCATATTGCATAACAAGAGAACAGATTGCTGGATAATCATCAAGAACAAGGTATACGATGTCACCTCATATGTGGAAGAACATCCCGGCGGTGATGCCATTCTAGCACATGCTGGAGATGATTCAACCGAAGGATTTTTCGGGCCACAGCACGCGACTCGAGTCTTTGACATGATTGAGGATTTCTACATTGGAGACTTGGACCAATAG 360 0.4111 MVLLIALALLLGVVIVFLLFNPRHQKYGQKGKAVSTSNDDKTSKSYSKNEVILHNKRTDCWIIIKNKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIEDFYIGDLDQ 119
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06648 119 Gene3D - 36 119 IPR036400 -
Vifa1g06648 119 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 74 81 IPR018506 GO:0020037
Vifa1g06648 119 SMART Cyt_b5_2 46 118 IPR001199 -
Vifa1g06648 119 Pfam Cytochrome b5-like Heme/Steroid binding domain 48 117 IPR001199 -
Vifa1g06648 119 PANTHER CYTOCHROME B5 28 117 - -
Vifa1g06648 119 PRINTS Cytochrome B5 signature 105 117 IPR001199 -
Vifa1g06648 119 PRINTS Cytochrome B5 signature 68 78 IPR001199 -
Vifa1g06648 119 PRINTS Cytochrome B5 signature 78 92 IPR001199 -
Vifa1g06648 119 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 43 118 IPR001199 -
Vifa1g06648 119 FunFam Sulfite oxidase, mitochondrial 41 119 - -
Vifa1g06648 119 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 41 118 IPR036400 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa1g06648 Vifa-Chr1 1031509965 1031511811 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06648 1 117 NADPH P450 reductases AT1G60660 64.167 3.87e-50 153
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06648 - - gmx:100527821 193.356