Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06567 ATGTTGTTATTCTCTAGTAATTTTGTTGCTGAAAAATGGCTAGGATTTGTGACAGCAATATGGGTACAAACAATATGTGGAAACAATTATACATTTGCAAACTATTCTGATGTGTTGAAGTCTCTGATGTTTCTGAGTCAGATGCAGCTTAACAATCTCTCTGTTGCTAAAGATGTTGGCAAAGCTTTTGGTATTTTCTCTGGTCTTGTTTCTGATCGTTGGCCAACGTCTGTTATTCTCATGATTGGTGCTATCATGGGGTTCATTGGTTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATCACCCCTCTCCCTTATTGGCTGATGTGTGTGTTCTTATGTATGGGAGGAAACAGCTCGACATGGATGAACACAGCAGTACTTGTAACTTGCATGAGAAGCTTCCCGAACAACCGCGGTCCAATTTCTGGTATTCTTAAAGGTTATTTAGGACTCAGCACAGCAATCTTCACTGACATATGCACAGCTTTGTTTTCCTCGGATCCATCCAAGTTTCTATTGATGCTCACAATTGTCCCTGCTGTTATTTGTCTCATTGCTGCTATTTTTCTTCATGAAACTCCACCAGCTTCTACTTCTACAGAAGAAAATCAAGAGACAAGGTTCTTCAATGTGTTTAACTTGATTGCAGTTACAGTAGCAGTTTATCTCTTGGTGTTTGATATCTCTGGACCTCATAAGCATGTTGTTTCATTGGTTTTCACAATAGGACTTTTGATCCTATTAGCCATGCCACTTCTTGTTCCTATATATTTGGTTTTAATCAAAACTAGACCTGGTTTTGATAAAGAAAAACAAATTCATGAACCACTTTTGGCACAAAAGATTGAAAAGGAAGAGACATGTGCCAAGGTGGAGGAAGTTAAGATTAAACGAAAACCGGTGTTAGGGGAAGAACATACTATCATAGAGATGGTGAAAACTGTTGATTTCTGGGTTTTGTTTATGTCATTTTTTTGTGGTGTGGGAACAGGACTATGTGTCATGAATAACATGGGACAAATGGGATTAGCACTTGGTTATCATGATGTTTCTTTGTTCATTTCTTTCATTAGCATTTGGGGTTTCTTTGGACGCATTCTTTCTGGTTCACTCTCTGAACACTACATCAGAAAATCGGGCATGCCAAGGTTAGTTTGGAATGCAGCAGCTCAAATTCTGATGGCTGCTGGTTACATTGCATTGGCTATGGCCTTACCAGGATCATTGTACATTGGTTCTATGCTTGTTGGAATATGCTATGGCGTTCGTCTTACAATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTGAAATACTATGGCTTATTATACAATATTCTCATTCTCAACCTTCCTATTGGTTCATTCATCTTTTCTGGTCTCATTGCTGGTTATCTTTATGATATTGAAGCTACTAGTGTGCCGGGAGGTGGAAACACTTGCATTGGAGCACATTGTTTCAGGCTTGTGTATTTTACTATGGCTTTTGCTTGTGTCTTGGGGTGTGGATTGGATATCTTGCTTTCTGTTAGAACAAAAAAGATATATTCCAAGATACATATAGAGAGAAATCTTGTCAACCCAATACTGAGATGA 1602 0.387 MLLFSSNFVAEKWLGFVTAIWVQTICGNNYTFANYSDVLKSLMFLSQMQLNNLSVAKDVGKAFGIFSGLVSDRWPTSVILMIGAIMGFIGYGVQWLVVSQRITPLPYWLMCVFLCMGGNSSTWMNTAVLVTCMRSFPNNRGPISGILKGYLGLSTAIFTDICTALFSSDPSKFLLMLTIVPAVICLIAAIFLHETPPASTSTEENQETRFFNVFNLIAVTVAVYLLVFDISGPHKHVVSLVFTIGLLILLAMPLLVPIYLVLIKTRPGFDKEKQIHEPLLAQKIEKEETCAKVEEVKIKRKPVLGEEHTIIEMVKTVDFWVLFMSFFCGVGTGLCVMNNMGQMGLALGYHDVSLFISFISIWGFFGRILSGSLSEHYIRKSGMPRLVWNAAAQILMAAGYIALAMALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFIFSGLIAGYLYDIEATSVPGGGNTCIGAHCFRLVYFTMAFACVLGCGLDILLSVRTKKIYSKIHIERNLVNPILR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06567 533 CDD MFS_Mch1p_like 12 504 - -
Vifa1g06567 533 SUPERFAMILY MFS general substrate transporter 27 516 IPR036259 -
Vifa1g06567 533 Pfam Nodulin-like 12 258 IPR010658 -
Vifa1g06567 533 Gene3D MFS general substrate transporter like domains 311 517 IPR036259 -
Vifa1g06567 533 Gene3D MFS general substrate transporter like domains 12 207 IPR036259 -
Vifa1g06567 533 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06567 Vifa-Chr1 1017381372 1017383231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06567 10 526 Nodulin-like Gene Family AT4G34950 63.486 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06567 - - cit:102624072 739.569