Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06565 ATGTCTTGTTGTTTGGTGTTTCTTCTTCTTCTGTTTGTGCTGTGTAGCTCAGAAGCAGATGTTGTGACTATTGATGTACAAGCAGCCAAGAGTCTCATCCAGACATATCACAATTATCTTGATGTTAGGACGGTGGAAGAGTTTTTGAAAGGGCATGTGGATGCAGCCAATATCTTTAACGTGCCATATATGTTGGATACACCAAAGGGCAAGGTGAAGAACCCTAATTTTCTTAAGGATGTTTCATTTGTATTCAACAAAGAAGATCATATCATTGTGGGTTGCCAAATTGGGTTGAGATCTCTATCTGCAACTTCTGATCTACTAGCTGAAGGTTTTATAAATGTGAAGGACATGGGAGGAGGTTATGTGGAATGGGTTAGAAACAAGCTTCCAGTGATACATAAGTGGCCAAAGAACAACTATAATAAGATCTAG 438 0.3904 MSCCLVFLLLLFVLCSSEADVVTIDVQAAKSLIQTYHNYLDVRTVEEFLKGHVDAANIFNVPYMLDTPKGKVKNPNFLKDVSFVFNKEDHIIVGCQIGLRSLSATSDLLAEGFINVKDMGGGYVEWVRNKLPVIHKWPKNNYNKI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06565 145 Pfam Rhodanese-like domain 31 128 IPR001763 -
Vifa1g06565 145 PANTHER THIOSULFATE SULFURTRANSFERASE 18 16 135 IPR044684 GO:0003824
Vifa1g06565 145 Gene3D - 13 133 IPR036873 -
Vifa1g06565 145 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 20 134 IPR036873 -
Vifa1g06565 145 ProSiteProfiles Rhodanese domain profile. 40 135 IPR001763 -
Vifa1g06565 145 SMART rhod_4 24 132 IPR001763 -
Vifa1g06565 145 CDD RHOD 40 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06565 Vifa-Chr1 1017356247 1017357117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06565 20 133 Sulfurtransferasese or Rhodanese AT5G66170 53.509 3.52e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06565 - K15692 aprc:113869191 195.667