Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06564 ATGAGTAGGATGGGGAGATGGGCAGGAGGAATATGTATTTGGGAGTTTAGGTGGAGGCGAAGGTTGCTTGTTTCAGAGGAAAACCTTATGGATGACCGTAACAGTTCTACTAACGGGATGGTTAAGCAGGATAAGAAGGATCCTGAGTTTGGTCGACATACAATTACATGTCCTCCTCTAATATGGGAGATAAGCATAGGTCTGGACATGTTGGCTATTATGCTCAAGCACAGTAGGCAGTGCATTATTCAAGAAGATAATGAGTTGGGGTGTGTTGTGTGTTTGGGGCATGATAAGTTGAGGGATCACTTGTTTATCTTGTGTCATGTTGCGTCTTTTGTGTGGTATAAGAAAAACAGTAGTCAACAAACCGTGTCCTTCTCAAACCGCTGCAATAACACTATTTCAGAAGCAAAAGTTGTGACTATTGATGTACAAGCAGCCAAGAATCTCATCCAGACAGATCACGTTTATCTTGATGTTAGGACGGTGGAAGAGTTTGTGAAAGGACATGTGGATGCAGCTAAGATCATTAATATTCCTTACATGGTAGATACATCTAAGGGCAGGGTGAAGAATCAAGATTTTCTAAAGGAGGTTTCATCTGCTTTCAACAAAGAAGATTATGTTGTTGTGGGTTGTAAAAGTGGGGTGAGATCTCTATATGCAACTTCTGATCTTCTAGCTGATGGTTTTAAGAATGTGAAGGACATGGGAGGAGGTTATATGGATTGGGTTAGAAACAAGTTCCCAGTGAAGACACCAGAAGCCAAAGAAGAGCTATAA 786 0.4122 MSRMGRWAGGICIWEFRWRRRLLVSEENLMDDRNSSTNGMVKQDKKDPEFGRHTITCPPLIWEISIGLDMLAIMLKHSRQCIIQEDNELGCVVCLGHDKLRDHLFILCHVASFVWYKKNSSQQTVSFSNRCNNTISEAKVVTIDVQAAKNLIQTDHVYLDVRTVEEFVKGHVDAAKIINIPYMVDTSKGRVKNQDFLKEVSSAFNKEDYVVVGCKSGVRSLYATSDLLADGFKNVKDMGGGYMDWVRNKFPVKTPEAKEEL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06564 261 Gene3D - 127 254 IPR036873 -
Vifa1g06564 261 Pfam Rhodanese-like domain 148 247 IPR001763 -
Vifa1g06564 261 ProSiteProfiles Rhodanese domain profile. 152 254 IPR001763 -
Vifa1g06564 261 CDD RHOD 146 246 - -
Vifa1g06564 261 SMART rhod_4 143 251 IPR001763 -
Vifa1g06564 261 PANTHER THIOSULFATE SULFURTRANSFERASE 18 118 259 IPR044684 GO:0003824
Vifa1g06564 261 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 139 252 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06564 Vifa-Chr1 1016918484 1016921195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06564 127 256 Sulfurtransferasese or Rhodanese AT5G66170 52.308 2.51e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06564 - K15692 psat:127120138 251.136