Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06563 ATGGTGGAAGAAAATGGAGAAGGTAGATCCTTATCAGAAACCCCCACTTGGGCTGTTGCAACTGTCATCACTCTCTTGGTTTCTCTTAGTTTCCTGTCTCATGGAACATTGAAAAAATTGGTTAAGTGGTTGGATAGAACTAAGAGAAAATCCCTTCTTTCTGCTTTGGAAAAGATGCAAGAAGAATTGATGCTGTTTGGACTTCTGTCGTTGTTGATGGGCCATTGGATTGTTTTTGTGGCAAAGATTTGTGTTAAATCATCAGTATTAAGTAGCAGATTTTTTCCATGTGCAATGGAGAAGAGTTTTGAAATTGTGAAACATAGTGTATGGTTGAATTCAGAATATTCTAATAAGACGATTCTCAGAGAGCAAGTGAATCATGGTCGGCATAGTTATTGTCCTAAGGGTCATGAATCATTTGCTTCTTACGAAAGCCTAGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGGGATCACTCATGTTTCCTACAGCTTTGTGGCTGTTGCTCTAGCCATGATCAAGATTTACAGCTGGAGAACATGGGAAAATGAAGCAAAGACTATTGCTATACAAAGCTTAGATGCTTCACAAAATGCTTCAAGTATAAGATTGAAGCGGCTTAGTACATTCATTTTTCACAACACATCTCATCCTTGGAGCCATCACAAAATTCTTGTTTGGCTGTTATGTTTTAGTCGCCAATTCTGGAGTTCAATCAATCGAGCCGATTACATGGCATTGCGCTTAGGCTTCATTACAAATCATGACCTTCCCCTGACTTACGATTTCCACAACTACATGCTTCGAAGCATGGACGAGGAATTTCGTGACATTGTAGGTGTTAGTGTGCTTCTCTGGGTATATGCAATATGCTGCATTTTTCTAAATTTTCATGGACACAACTTTTACTTTTGGCTTTCCTTTGTCCCAGCAATTTTGATCCTTATAATCGGTACTAAATTGCATCGAGTCGTTGTAAAATTGGCCGTTGAAGTAATAGATGATTGTCCAGATAAGAAGCATCATCGGTTTAATTTAAGAGACGAACTCTTTTGGTTTGGAAAGCCAGGGCTTCTGTTGAAATTAATACAATTGATATCTTTCTTGAACGCATTTGAAATGTCAACATTCTTATGGTCCCTGTGGGAAATTAAAGAAGCTTCTTGCTTCATGAACAACCGAACATTCGTTGTGATCCGCTTGTCGTTCGGGGTTGTTTCACAAGTCTGGTGCAGCTTCATAACATTTCCGCTGTATGTTATCATCACACAGATGGGATCAAGATTCAAAAAAACAGTGATATCTGAAAATGTAAGAAAGTCATTATCTAAATGGCAGAGAAGAGTGAAGGAGAAACAAAGTTCCTCTTATGAAATCCTTAATACATCAACAACAACATCATTGGAGTCTTTGATGCATGGAATGGACAATTGTACTTCTGCCTTACCCAGAGAGACTCAGGAAGGAAGTTCCTCAAGAACAAAAGATGTTTGTTTTTCTAACATTGATGATGTATTAATGATTCATAGCAATACAGAATTTTCAAGTTATGATGAAGATCAACATGATCATGATGTAAAATATGATTTGTCTTCTTCTCCATTGTCTTGA 1614 0.3779 MVEENGEGRSLSETPTWAVATVITLLVSLSFLSHGTLKKLVKWLDRTKRKSLLSALEKMQEELMLFGLLSLLMGHWIVFVAKICVKSSVLSSRFFPCAMEKSFEIVKHSVWLNSEYSNKTILREQVNHGRHSYCPKGHESFASYESLEQLHRFVFVLGITHVSYSFVAVALAMIKIYSWRTWENEAKTIAIQSLDASQNASSIRLKRLSTFIFHNTSHPWSHHKILVWLLCFSRQFWSSINRADYMALRLGFITNHDLPLTYDFHNYMLRSMDEEFRDIVGVSVLLWVYAICCIFLNFHGHNFYFWLSFVPAILILIIGTKLHRVVVKLAVEVIDDCPDKKHHRFNLRDELFWFGKPGLLLKLIQLISFLNAFEMSTFLWSLWEIKEASCFMNNRTFVVIRLSFGVVSQVWCSFITFPLYVIITQMGSRFKKTVISENVRKSLSKWQRRVKEKQSSSYEILNTSTTTSLESLMHGMDNCTSALPRETQEGSSSRTKDVCFSNIDDVLMIHSNTEFSSYDEDQHDHDVKYDLSSSPLS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06563 537 Pfam Mlo family 9 468 IPR004326 GO:0006952|GO:0016020
Vifa1g06563 537 PANTHER MLO-LIKE PROTEIN 1 7 476 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06563 Vifa-Chr1 1016868206 1016871394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06563 7 534 MLO family AT1G11000 47.646 4.93e-159 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06563 K08472 - gmx:100807014 833.558