Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06562 ATGGTGGAAGAAAATGGAGAAGGTAGATCCTTATCAGAAACCCCCACTTGGGCTGTTGCAACTGTCATCACTCTCTTGGTTTCTCTTAGTTTCCTGTCTCATGGAACATTGAAAAAATTGGTTAAGTGGTTGGATAGAACTAAGAGAAAATCCCTTCTTTCTGCTTTGGAAAAGATGCAAGAAGCAGAATTGATGCTGTTTGGACTTCTGTCGTTGTTGATGGGCCATTGGATTGTTTTTGTGGCAAAGATTTGTGTTAAATCATCAGTATTAAGTAGCAGATTTTTTCCATGTGCAATGGAGAAGAGTTTTGAAATTGTGAAACATAGTGTATGGTTGAATTCAGAATATTCTAATAAGACGATTCTCAGAGAGCAAGTGAATCATGGTCGGCATAGTTATTGTCCTAAGGGTCATGAATCATTTGCTTCTTACGAAAGCCTAGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGGGATCACTCATGTTTCCTACAGCTTTGTGGCTGTTGCTCTAGCCATGATCAAGATTTACAGCTGGAGAACATGGGAAAATGAAGCAAAGACTATTGCTATACAAAGCTTAGATGCTTCACAAAATGCTTCAAGTATAAGATTGAAGCGGCTTAGTACATTCATTTTTCACAACACATCTCATCCTTGGAGCCATCACAAAATTCTTGTTTGGCTGTTATGTTTTAGTCGCCAATTCTGGAGTTCAATCAATCGAGCCGATTACATGGCATTGCGCTTAGGCTTCATTACAAATCATGACCTTCCCCTGACTTACGATTTCCACAACTACATGCTTCGAAGCATGGACGAGGAATTTCGTGACATTGTAGGTGTTAGTGTGCTTCTCTGGGTATATGCAATATGCTGCATTTTTCTAAATTTTCATGGACACAACTTTTACTTTTGGCTTTCCTTTGTCCCAGCAATTTTGATCCTTATAATCGGTACTAAATTGCATCGAGTCGTTGTAAAATTGGCCGTTGAAGTAATAGATGATTGTCCAGATAAGAAGCATCATCGGTTTAATTTAAGAGACGAACTCTTTTGGTTTGGAAAGCCAGGGCTTCTGTTGAAATTAATACAATTGATATCTTTCTTGAACGCATTTGAAATGTCAACATTCTTATGGTCCCTGTGGGAAATTAAAGAAGCTTCTTGCTTCATGAACAACCGAACATTCGTTGTGATCCGCTTGTCGTTCGGGGTTGTTTCACAAGTCTGGTGCAGCTTCATAACATTTCCGCTGTATGTTATCATCACACAGATGGGATCAAGATTCAAAAAAACAGTGATATCTGAAAATGTAAGAAAGTCATTATCTAAATGGCAGAGAAGAGTGAAGGAGAAACAAAGTTCCTCTTATGAAATCCTTAATACATCAACAACAACATCATTGGAGTCTTTGATGCATGGAATGGACAATTGTACTTCTGCCTTACCCAGAGAGACTCAGGAAGGAAGTTCCTCAAGAACAAAAGATGTTTGTTTTTCTAACATTGATGATGTATTAATGATTCATAGCAATACAGAATTTTCAAGTTATGATGAAGATCAACATGATCATGATGTAAAATATGATTTGTCTTCTTCTCCATTGTCTTGA 1617 0.3785 MVEENGEGRSLSETPTWAVATVITLLVSLSFLSHGTLKKLVKWLDRTKRKSLLSALEKMQEAELMLFGLLSLLMGHWIVFVAKICVKSSVLSSRFFPCAMEKSFEIVKHSVWLNSEYSNKTILREQVNHGRHSYCPKGHESFASYESLEQLHRFVFVLGITHVSYSFVAVALAMIKIYSWRTWENEAKTIAIQSLDASQNASSIRLKRLSTFIFHNTSHPWSHHKILVWLLCFSRQFWSSINRADYMALRLGFITNHDLPLTYDFHNYMLRSMDEEFRDIVGVSVLLWVYAICCIFLNFHGHNFYFWLSFVPAILILIIGTKLHRVVVKLAVEVIDDCPDKKHHRFNLRDELFWFGKPGLLLKLIQLISFLNAFEMSTFLWSLWEIKEASCFMNNRTFVVIRLSFGVVSQVWCSFITFPLYVIITQMGSRFKKTVISENVRKSLSKWQRRVKEKQSSSYEILNTSTTTSLESLMHGMDNCTSALPRETQEGSSSRTKDVCFSNIDDVLMIHSNTEFSSYDEDQHDHDVKYDLSSSPLS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06562 538 Pfam Mlo family 9 469 IPR004326 GO:0006952|GO:0016020
Vifa1g06562 538 PANTHER MLO-LIKE PROTEIN 1 7 477 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06562 Vifa-Chr1 1016868206 1016871394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06562 7 535 MLO family AT1G11000 47.556 2.68e-157 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06562 K08472 - gmx:100807014 828.935