Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06483 ATGGTAGGACTTCATTTCATTAGATCAAGACTCAAAACTGATTTAGATAAAATCGCTTCGTCTCATGCTCGTCTTGCTTCTCTAAACCCTTTCATTGTTGATCAAATTCATCTTGAACTTGAAATGGTTACGAAACACAAACGAGTTTCAACTTTTGCAAGCTGTGGTTTTGTTCCAACAAACGAAAACATGATTGTTTTTAAGAAAAATTCTGGTCTTCTTCTTATGCTTATTCCACAAGTGCTTCTTGGGAACACGTTGTACCCCTCCATGTTTGAGATTTTGCATATGGGTGGGAAACATTCAGTGTTTCTTGTGGCTACTGTTTTTGGGTTGCTTGTGGTTCAAGTTACATTGTTTTGTTTGATGGATTGGGATTCAGAAGGTTTGAAGGGGATGAATAGTTATGAGAAATTGATTGGTGTGTTGTTTCAGAGTATTAATTCAAGACATACTGGAGAAACTATTGTGGATATCTCAATTCTATCACAAGCCATGTTGGTGTTGTTTGTGCTCATGATGTACCTACCTCCGTACACGGCATTCCTCCCATTAAAGGATTCAGAAATTAGCATATGCATAACTGAGAGGAAAAAATTGAAGGAAGATCCTCTCAATTTCAATGTTTTGAATATTGTTCTTGAAGTTGTAAGTGCTTATGGGAACGTAGGATTTAGTACAGGATACAGTTGTGAAAGACAATTACATCCAGAGGAAAATTGTGAAAACAAGTGGATTGGATTTGTTGGAAAATGGAGTGATGAGGGAAAGATTATTCTTATAATTGTTATGTTGTTTGGAAGGCTAAAAAAATTCAACATGGATGGAGGCAAGCCATGGAAACTTCTCTAG 852 0.365 MVGLHFIRSRLKTDLDKIASSHARLASLNPFIVDQIHLELEMVTKHKRVSTFASCGFVPTNENMIVFKKNSGLLLMLIPQVLLGNTLYPSMFEILHMGGKHSVFLVATVFGLLVVQVTLFCLMDWDSEGLKGMNSYEKLIGVLFQSINSRHTGETIVDISILSQAMLVLFVLMMYLPPYTAFLPLKDSEISICITERKKLKEDPLNFNVLNIVLEVVSAYGNVGFSTGYSCERQLHPEENCENKWIGFVGKWSDEGKIILIIVMLFGRLKKFNMDGGKPWKLL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06483 283 Pfam Cation transport protein 103 176 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vifa1g06483 283 Pfam Cation transport protein 192 237 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vifa1g06483 283 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 48 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06483 Vifa-Chr1 1005874320 1005877592 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06483 49 282 Inorganic Solute Cotransporters AT4G10310 50.338 7.03e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06483 K24976 - vvi:100248819 342.428