Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06481 ATGAGGAACAACTTTGCCAAAAACTCACAACATGTTACTTTCTTTCCTAACAAATTCCAATTCAACAACCTCTTCATTCAACTCTTTTATTTCATTATCCTTTCTCTCTTTGGTTACTTGGGTCTCAAGTTTTCAAACCCAAGATCGTCTATTAAACCAAATGATTTTGATCTTTTCTACACCTCCGTTTCTGCTTCCACTGTCTCTAGCATGACATCAATAGAAATGGAAGCTTTCTCTAATTCCCAACTCATTCTTCTTACCTTTCTTATGTTAGTTGGTGGTGAAGTTTTCACTTCCATGCTTCAGCTTTTTCTTGATAGGTTCTTCAACTTCACCCAAAATCATTCTCTCAAAAATGAACCCCCTCCAATTCATATTAATCATATTGAACTTGGTTTAGTTTCTATTCCTCAGCCAGAAAACCATAATAACAATACTAACAATAAAGATAGAATAAAGTATAATTCTCTTAGTTTAGTGACTTTGTACTTAACCTATATACCAAGTGCAAAACAAGTACTTAAAAGCAAAGGCATCAAGATAGAAACATTTTCTTTATTTACAATAGTTTCAACTTTTGCAAGTTGTGGTTATGTGCCAACCAATGAGAACATGATTGTTTTCAAGAAGAATTCAGGTATTCTTCTTCTTATACTTCCACATATACTTTTAGGTAATACCCTTTATCCATCATGTTTGAGGCTTTCCATAACAGTTTTGAAAAGTGTTACTAAAAGAGAAGAATTCACTTACTTGTTGAAGAACTCAAAGGAAATGGACTATGACCATTTGTTATCTCCTATTCATTGTTGGAACCTTGTTGTCACTGCCTTTGGTTTCAATATAATTCAATTTCTATTGTTTTGTTCCTTGGAGTGGAGTTCAAAGATTATGGAGGGACTAAATCTCTACCAAAAAGTGGTTGCGTCTTTGTTTCAAGTTACAAACGCTAGACATTCTGGTGAATCCGTTTTTGATCTTTCCACCATCTCTTCGGCTATATTGGTGCTCTTCATTGTCATGATGTATCTTCCACCATACACAACATTTTTATCTGTAAAGGACCACACAAATATTGATGTGAAGAAAGACCAAAAATGCTTAGTGGAGTGTGTTGTATTATCTCAACTCTCTTATTTGGTTATTTTCATTATTGTCATTTGCATCACTGAGAGACAAAGCTTAAAAGAAGATCCCCTCAATTTTAACGTCTTGAATATTACCCTAGAAGTTATCAGTGCTTATGGGAATGTAGGGTTTTCGACAGGATATAGCTGCTCAAGGAAATTGAAAGCCGATTCAATGTGCAAAGATTCATGGATTGGATTTTCGGGTAGGTGGAGTACAAAAGGGAAGGTTACACTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAATATGAATGGAGGCAAAATCCTCGCACCTCTCCATGCTATAGTCTTTGGTACTAGATCGTAG 1467 0.3511 MRNNFAKNSQHVTFFPNKFQFNNLFIQLFYFIILSLFGYLGLKFSNPRSSIKPNDFDLFYTSVSASTVSSMTSIEMEAFSNSQLILLTFLMLVGGEVFTSMLQLFLDRFFNFTQNHSLKNEPPPIHINHIELGLVSIPQPENHNNNTNNKDRIKYNSLSLVTLYLTYIPSAKQVLKSKGIKIETFSLFTIVSTFASCGYVPTNENMIVFKKNSGILLLILPHILLGNTLYPSCLRLSITVLKSVTKREEFTYLLKNSKEMDYDHLLSPIHCWNLVVTAFGFNIIQFLLFCSLEWSSKIMEGLNLYQKVVASLFQVTNARHSGESVFDLSTISSAILVLFIVMMYLPPYTTFLSVKDHTNIDVKKDQKCLVECVVLSQLSYLVIFIIVICITERQSLKEDPLNFNVLNITLEVISAYGNVGFSTGYSCSRKLKADSMCKDSWIGFSGRWSTKGKVTLILVMFFGRLKKFNMNGGKILAPLHAIVFGTRS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06481 488 Pfam Cation transport protein 370 466 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vifa1g06481 488 Pfam Cation transport protein 158 356 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vifa1g06481 488 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 17 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06481 Vifa-Chr1 1005232187 1005235674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06481 43 478 Inorganic Solute Cotransporters AT4G10310 47.917 1.34e-147 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06481 K24976 - gmx:100800875 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06481 1 1005232187 1005235674 Vifa1g06481 1 1005232187 1005235674 ECH