Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06480 ATGAGGAACAACTTTGCCAAAAACTCACAACATGTTACTTTCTTTCCTAACAAATTCCAATTCAACAACCTCTTCATTCAACTCTTTTATTTCATTATCCTTTCTCTCTTTGGTTACTTGGGTCTCAAGTTTTCAAACCCAAGATCGTCTATTAAACCAAATGATTTTGATCTTTTCTACACCTCCGTTTCTGCTTCCACTGTCTCTAGCATGACATCAATAGAAATGGAAGCTTTCTCTAATTCCCAACTCATTCTTCTTACCTTTCTTATGTTAGTTGGTGGTGAAGTTTTCACTTCCATGCTTCAGCTTTTTCTTGATAGGTTCTTCAACTTCACCCAAAATCATTCTCTCAAAAATGAACCCCCTCCAATTCATATTAATCATATTGAACTTGGTTTAGTTTCTATTCCTCAGCCAGAAAACCATAATAACAATACTAACAATAAAGATAGAATAAAGTATAATTCTCTTAGGTATTTAAGTTATGTAGTTTTGGGTTATCTTATGATTGTTCAATTTTTTGGTTTTAGTTTAGTGACTTTGTACTTAACCTATATACCAAGTGCAAAACAAGTACTTAAAAGCAAAGGCATCAAGATAGAAACATTTTCTTTATTTACAATAGTTTCAACTTTTGCAAGTTGTGGTTATGTGCCAACCAATGAGAACATGATTGTTTTCAAGAAGAATTCAGGTATTCTTCTTCTTATACTTCCACATATACTTTTAGGTAATACCCTTTATCCATCATGTTTGAGGCTTTCCATAACAGTTTTGAAAAGTGTTACTAAAAGAGAAGAATTCACTTACTTGTTGAAGAACTCAAAGGAAATGGACTATGACCATTTGTTATCTCCTATTCATTGTTGGAACCTTGTTGTCACTGCCTTTGGTTTCAATATAATTCAATTTCTATTGTTTTGTTCCTTGGAGTGGAGTTCAAAGATTATGGAGGGACTAAATCTCTACCAAAAAGTGGTTGCGTCTTTGTTTCAAGTTACAAACGCTAGACATTCTGGTGAATCCGTTTTTGATCTTTCCACCATCTCTTCGGCTATATTGGTGCTCTTCATTGTCATGATGTATCTTCCACCATACACAACATTTTTATCTGTAAAGGACCACACAAATATTGATGTGAAGAAAGACCAAAAATGCTTAGTGGAGTGTGTTGTATTATCTCAACTCTCTTATTTGGTTATTTTCATTATTGTCATTTGCATCACTGAGAGACAAAGCTTAAAAGAAGATCCCCTCAATTTTAACGTCTTGAATATTACCCTAGAAGTTATCAGTGCTTATGGGAATGTAGGGTTTTCGACAGGATATAGCTGCTCAAGGAAATTGAAAGCCGATTCAATGTGCAAAGATTCATGGATTGGATTTTCGGGTAGGTGGAGTACAAAAGGGAAGGTTACACTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAATATGAATGGAGGCAAAATCCTCGCACCTCTCCATGCTATAGTCTTTGGTACTAGATCGTAG 1524 0.3471 MRNNFAKNSQHVTFFPNKFQFNNLFIQLFYFIILSLFGYLGLKFSNPRSSIKPNDFDLFYTSVSASTVSSMTSIEMEAFSNSQLILLTFLMLVGGEVFTSMLQLFLDRFFNFTQNHSLKNEPPPIHINHIELGLVSIPQPENHNNNTNNKDRIKYNSLRYLSYVVLGYLMIVQFFGFSLVTLYLTYIPSAKQVLKSKGIKIETFSLFTIVSTFASCGYVPTNENMIVFKKNSGILLLILPHILLGNTLYPSCLRLSITVLKSVTKREEFTYLLKNSKEMDYDHLLSPIHCWNLVVTAFGFNIIQFLLFCSLEWSSKIMEGLNLYQKVVASLFQVTNARHSGESVFDLSTISSAILVLFIVMMYLPPYTTFLSVKDHTNIDVKKDQKCLVECVVLSQLSYLVIFIIVICITERQSLKEDPLNFNVLNITLEVISAYGNVGFSTGYSCSRKLKADSMCKDSWIGFSGRWSTKGKVTLILVMFFGRLKKFNMNGGKILAPLHAIVFGTRS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06480 507 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 17 495 - -
Vifa1g06480 507 Pfam Cation transport protein 147 375 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vifa1g06480 507 Pfam Cation transport protein 390 485 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06480 Vifa-Chr1 1005232187 1005235674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06480 43 497 Inorganic Solute Cotransporters AT4G10310 49.894 7.68e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06480 K24976 - gmx:100800875 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06480 1 1005232187 1005235674 Vifa1g06480 1 1005232187 1005235674 ECH