Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06478 ATGAAGAAGAAGAAGGGATGGCCGGATACGACGGAGTGCGCATTTGGATTTTTTACTGACTCTTCTTCCACTTTTCAAATCTGCTTCTCTAACTGTTGTTGTTATTTTTCACAGCCGTTTGCAAAGGGAATAGATGGAGAACTGGGAGATGGAAGGACGGCGGAGTTGATTGGGTGTTGGACCGGTAGGCATAGGCGGAGGAACTGTGATGGTAGTGGGGAGTTGAGGTCTACGGTTGAGGGCAGAACAAGAAGGGAGAAAGATGGATTTTACGCTGTGATGAAGAACCAAGAGGCAGTGAATCTTATCAGGCACATAGAGGATCCACAAGAAGCAGCTGAATGCCTAGCTAAGGAAGCATTGGTTAGGAGGAGCAAAGGTTTTGATATGCAGGATAGTTTTGAATATCCAGAAAAATGGTTTTGA 426 0.4531 MKKKKGWPDTTECAFGFFTDSSSTFQICFSNCCCYFSQPFAKGIDGELGDGRTAELIGCWTGRHRRRNCDGSGELRSTVEGRTRREKDGFYAVMKNQEAVNLIRHIEDPQEAAECLAKEALVRRSKGFDMQDSFEYPEKWF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06478 141 Gene3D - 85 132 IPR036457 -
Vifa1g06478 141 SUPERFAMILY PP2C-like 88 125 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06478 Vifa-Chr1 1005046948 1005048628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06478 89 127 PP2C-type Phosphatase Gene Family AT3G23360 74.359 4.96e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06478 K19704 - gmx:100794054 70.0922