Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06463 ATGAAAACAGTGACAGCAACGTCGTTTGATGTCTCCGCCGCTTGCTTCCATCCACGCCCTCTTAATCTACGCCATAAGACCAACATGACTAGTTTTTGGTTTGTAAGATCCTCCAACTTTAATAAGGGACAAAGAAGCGTTGTGGTTCAACAAAAGTTTTTGAACTTCCGCATGATGTGTAGTTTAAAGGGGAATTTGGAGGAGGTTGTTGGAGTTCCATCTTCAGTGCCTGTGCGTGTAGCTCACGACCTTTTTCTAGCTGGCCATAAGTATCTTGATGTAAGGACCACTGAAGAGTTTAATGCTGGACATGCTCCTGAGGCAATTAACATACCCTATATGTATAGAGTTGGATCAGGGATGACAAAGAATAGCAATTTTGTTAAAGAAGTTTCTTCACATTTTAGAAAAGAAGCTGAAATTATTGTTGGGTGTCAACTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTGTTAGCTTCTGGGTTCAATGGAGTCACAGACATAGCTGGTGGTTATGCTGCTTGGACCCAAAATGGACTTCCTACCGAAAGATGA 558 0.4194 MKTVTATSFDVSAACFHPRPLNLRHKTNMTSFWFVRSSNFNKGQRSVVVQQKFLNFRMMCSLKGNLEEVVGVPSSVPVRVAHDLFLAGHKYLDVRTTEEFNAGHAPEAINIPYMYRVGSGMTKNSNFVKEVSSHFRKEAEIIVGCQLGKRSMMAATDLLASGFNGVTDIAGGYAAWTQNGLPTER 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06463 185 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 74 184 IPR036873 -
Vifa1g06463 185 SMART rhod_4 75 182 IPR001763 -
Vifa1g06463 185 Gene3D - 64 184 IPR036873 -
Vifa1g06463 185 ProSiteProfiles Rhodanese domain profile. 85 185 IPR001763 -
Vifa1g06463 185 Pfam Rhodanese-like domain 91 178 IPR001763 -
Vifa1g06463 185 CDD RHOD 92 176 - -
Vifa1g06463 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 11 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06463 Vifa-Chr1 1003863189 1003864458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06463 67 182 Sulfurtransferasese or Rhodanese AT5G66170 45.763 1.47e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06463 - - aprc:113868825 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06463 1 1003863189 1003864458 Vifa4g02317 4 697037634 697038648 PCT