Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06390 ATGTCTTCGCTATCAGGTTTCCTCAAGATACAAATTTTTCTTCATTCAAGGTCCTTTCAAGGAACAAGGGTATTAGGGCCTAACTCAGCCAGAGAATCAGGATTTCTCTTCATTTTGTTCAAGCTTGGTAAGGATTCTTCTATGGAGGAGCTCATCCAGCTCATTTTATCAGATGGAGGTTGGTCGATTCAAATGCAAGGATATGAAAAGGGAGAAAAAGGTCTCGGAGACACCAAGGATAGTTCAAATATTAATGTTTCGTCAGAGCCAATGCAGTGTGAATCTCACCCTATAACTCATAGTGCACCAAATGAAAGTATAGATAGTGATAATGACAATAAAATTATTGTAGACAAAGATACGGTGGACCACACAGCTTCTCTAGATTTGAACCTTGATCATATATCTGGTGAAAATCAAAAGCATTTGCTGCATATTACCGAGAACCATCTCGACAAGGGGGATTCAGTAGAGGAAAAAGTCAGCTGTTTAGAGAGCAAAAAGGAACAAAAAAACATGGAACTTGTGGGTATGGGTGACCTATCACATTTATTTTCTGTTGTGAAAATAGAAGTTTCATCATGTTCAAGAGATATTCACAATTCTTGTACATATGATGATGGAAAATATGAGGTGGATCTGCAAATTGATCCCAAATCTAGAAAGAAACCCAAAATTGCGTGTGAAAATATGAGTATCTCTGTGACACTGGAGAGCTGCCCAATGCAAATTTTTGGTACTTCTTTCAAGCCTATAATTTTAGGATCCGTTGTTCATGGAAAGCCATGGTCCGGTAAGAATGAAATATATCTAAAAGGATTCAAGAGTCGAGTTAATTTCTTTAATATTCTGAATCGCAACAGAACCTCCTAA 873 0.3746 MSSLSGFLKIQIFLHSRSFQGTRVLGPNSARESGFLFILFKLGKDSSMEELIQLILSDGGWSIQMQGYEKGEKGLGDTKDSSNINVSSEPMQCESHPITHSAPNESIDSDNDNKIIVDKDTVDHTASLDLNLDHISGENQKHLLHITENHLDKGDSVEEKVSCLESKKEQKNMELVGMGDLSHLFSVVKIEVSSCSRDIHNSCTYDDGKYEVDLQIDPKSRKKPKIACENMSISVTLESCPMQIFGTSFKPIILGSVVHGKPWSGKNEIYLKGFKSRVNFFNILNRNRTS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06390 290 ProSiteProfiles FYR domain FYRN motif profile. 241 290 IPR003888 GO:0005634
Vifa1g06390 290 MobiDBLite consensus disorder prediction 88 112 - -
Vifa1g06390 290 MobiDBLite consensus disorder prediction 88 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06390 Vifa-Chr1 995552324 995554840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06390 245 290 JUMONJI Transcription Factor Family AT1G30810 47.826 1.06e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06390 K11446 - gmx:100801775 221.09