Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06376 ATGCAGGAACCTAACCCTAACCCTAGCCCTAGCCCTTCAAAGGACTCAACTTCCAATCCTAAAAGTTCAAGGGAACAAGAAAGCAGCCTGAAAACCGCTCATGAAGTGTTGACTGAGTTCAGCGCGGGTGATAAGGATACCGGTCGTGGCGGCCGTGAAGATTGGAGGGTGGATGAGAATGGTGATGGAGTGAGTGAAGGTCAAGCTTTGAAGAAGAGAAAGAATAATGAAGAGAAAGAGAATCCTTCTGAAAATCGAGTTTGTCCTAAATGTAAAAAAGAGTTTCCTACGTGGGAGACTACGATTGGCCACATGCAAGAACACCCTAGTTATACTTCTATTGGTTCTTCTTCAGCACTTGTCAACCTACATCAATTCGATCTAAATAAGGTTGATGATGGGGTCCAACCAATGGTGATAGAAGGAACCTCTAATGTTGCACTTAAGTCCGCTGAAGAAAAGGAATATGAGAGCAAAGATTTAAGATTTGACTTGAATCAGTTGCCTCCTAATGAAGAAGATGATGTAATGTAA 534 0.4251 MQEPNPNPSPSPSKDSTSNPKSSREQESSLKTAHEVLTEFSAGDKDTGRGGREDWRVDENGDGVSEGQALKKRKNNEEKENPSENRVCPKCKKEFPTWETTIGHMQEHPSYTSIGSSSALVNLHQFDLNKVDDGVQPMVIEGTSNVALKSAEEKEYESKDLRFDLNQLPPNEEDDVM 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06376 177 MobiDBLite consensus disorder prediction 1 87 - -
Vifa1g06376 177 MobiDBLite consensus disorder prediction 151 169 - -
Vifa1g06376 177 MobiDBLite consensus disorder prediction 151 177 - -
Vifa1g06376 177 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Vifa1g06376 177 MobiDBLite consensus disorder prediction 27 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06376 Vifa-Chr1 992803580 992804933 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vifa1g06376 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06376 - - psat:127123571 249.98