Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06365 ATGGTGATTTCTACTTCCAAAATTGTGTTATCACTCTCAATGTTGATAACTATTGTTGTTTCTTTTCAAGTTACAAATGGTGTGAAGAATTTAAGGGCTCCATGGACTCCAAACAGAGTATACATTTCCATTACCAACAACATAACTAGTCCTCAACTCGGTGTTAATTGTAAAGATAAAAACCATGAAATCGGTTTTCGATCATTGAAATTTGGAGAAACTTACACGTTTGATTTTCAGCCTAAGCCTATTATTAGAGCATCTTTATACTTTTGTCGATTTACATGGGGTAATGAATTTCATTACTATGATATTTATGTTGAATTTAGGGATCACGATGTATGCAGCAAATGTAATTGGAAGATAAATAAATCAGGACCATGTAGGACAACTGAGGCATCTGATACATGTTATCCTTGGAATCCTAAACAAGTTATAGAAGGGAGAGTTGAAGAGAATAATACTACTCTTAATCTTAATGTGTAA 486 0.3292 MVISTSKIVLSLSMLITIVVSFQVTNGVKNLRAPWTPNRVYISITNNITSPQLGVNCKDKNHEIGFRSLKFGETYTFDFQPKPIIRASLYFCRFTWGNEFHYYDIYVEFRDHDVCSKCNWKINKSGPCRTTEASDTCYPWNPKQVIEGRVEENNTTLNLNV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06365 161 PANTHER - 40 131 IPR010264 -
Vifa1g06365 161 Pfam Plant self-incompatibility protein S1 42 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06365 Vifa-Chr1 990957545 990958030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06365 18 145 Carbohydrate Esterase AT3G16970 33.803 2.28e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06365 - - tpra:123904583 164.081