Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06334 ATGGGAGGCTTATTGCATTTTTTTGAATTCAATCAAGGGAGGATGGCCAAGAAAGTTCATGCTCACAAGAGACGTCATGTTGACTTCGAAACTCCTCGAAATAGTTTAGATCTGCAAGAAGAAACATCTCAGAAATACGGTCCGCGAGGAGAATTACCTCACCATTATCAAGTAGAAGAAGATTGGTGTGAAAATAACCGTTACTCAAACACCGGTTCGATGAAAAAGTTGATCAGTGAAGAGCTATCGGCGCGAACAAGCACAAGGCAAAATGCACCAAGCATTGTGGCAAGGTTGATGGGGTTAGATATGATGCCGGCAGAGACTAAATCTGCTGCTCCATCAGATAAAAGAATAAGTGAAAATACAGCAAAGAAGTATTCAAACAAGAGAATGAATGGTTCCAACTTTAATTCTTCTAGCCATATTGAATTTGATTCGGTTTACGAAGCCATAGATGACGATGATGATGATGATGATGATGGATGGAGCCGGAGTTTTGGAGAACCGAGGCCACGGGAACATCCACAGGAAGAGGAACTTCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCTGCAAGGTTTCAAGAATGTTCGAGGTTTGCTGAAATCGGAAGTGTTTCTAGCCGATTGATCTTTCAAGAGAATCTGAACAAGGAAAAGGCTGCACATAATATAAGCATGCAAAGGAAAGTATTTCCTTCAAAGAGCAGAACTCTAAGTAGAGACTTTGAAGAGTCCTTAATGATAAAATCTTACAACAGACTAGGGGCATCTTCTTCTCCGACTCGAATAGTTATCTTGAAGCCCGGTCCTGATAGTATATTCAGCCATGAAGAGAATTGGACCAGTGCTTCAGGAGCTTTACCTGGGAGACATAGTGTAGAAGATTTTCTTGAGGAGGTGAAAGAGCGTCTAAAATGCGAACTCCAAGGAAAAAATGTCACAAAAGGAAGTGAAATCGAGACACTGCGCAATATAAAACCCTCTGATCCTAAACTCATTGCTCGTCAAATAGTAAAGCAGGTCAAAGAAAATGTGAATAGAGATTCTGACTCGAATTCAACTAGATCATACAATGGTGAAGTGAAGTTCAATGGACCGAATTATCCGGAATTTATCAGTAGAGATACAAGGAGTTACTTGTCAGACAAGCTAACAAATACTGTAAAAAGTGAAAGACGCGATGATGACATTTATGAAGTGAACTCAAGATCACATGCATTTGACAATCAAAGAGTTAGACTCAAGAAAACAGAAGGTATTTTGCATTGTGCAAATGAATGGGAAATATCAAAAGAGGAAACAGAAATACAAACAGGATCTTTCAGACACGAACCAGACAACGACATTTTGCTCCACAGAGAGTTATTATCTCCAAGGAACCTTGTAAGATCATTGTCAGCTCCTGTATCAAGATCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGACAGACACATTTTAACCGGTGCTCATATTCGGAGAAAGCTCGAAGCTGTTGAAACTATGTCTGTTAATGTTAAAAAACAGAAAAAAGAGAGGTTTAATCATATAAAAGAAAGGGTCTCCAATTTTAGATACAGTTTTGCTCTAAGAGGGAGGCTTTTTGGCAAGAGGAACCAATCAATGGCAGAATCACACGAAAATGAATACCGTCCAGCAATGACAGATATCAGAAGTGGCCCGACCGTGCTTATGAACTGCGGCAGCGAGAGACATGAGAACTACACTGAGGTACCTCCTAGTCCTGCATCTGTATGCAGTAGTGTTCATGAAGACTTTTGGAGGCGAAGCGAATATTTAAGTCCAATATCAACTCCTGATGTGTCCTCAAGAGATGATACTGTTATGCCTCAAGTTTTCAGAGATATCAGCTCTGGTTTAAATGAGCTAAGAAGACAACTCAATCAACTTGATTCTGATGATGTTGATGTTGAGGACTTCAGTATGAAACATGAACCTTCTGAGTCTGAATTGATGCAAATAAATGATCCATCAGAATCTTACATAAGAGATTTACTTCTCGCGTCTGGCCTATACTTCGGTTCTTGGGACAAATCTTTGTTAAGAGGGGACACATACGCGAAGCCTATTGGAAATTCAGTTTTCGAAGAAGTTGAAGAATCTCATAAGAATTTAATCAAGGAGAATGATGTGAATTTCACAAAGGATCAAAGTGAGAGTAGCCACAAGATTTTGCTTGATTTGTTAAACGAGGCACTTTCGGATGTTCTTGGACCGCCTTCCACATTGTCTAGATTCAGAAAGAAATTATGCAAGTCTTCCATGTTGTCGCCGCCTCAAGGAAAGGAACTGTTGAAGTTAGTATGGGAAAATATCCGCGTCTCGTTACATCCTTCATCTGATATATCTCATTATTCAGTTGATACTTTGGTTGCTCAACACTTGAGTTCAATTCCTTGGTCTGGAATAATCAATGATGAGATAAATATATTAGGAAGAGAGGTAGAATGTCTTATAACTAAAGATCTTGTTGAAGAACTCACAAAGGATTTGCTTTGA 2529 0.3934 MGGLLHFFEFNQGRMAKKVHAHKRRHVDFETPRNSLDLQEETSQKYGPRGELPHHYQVEEDWCENNRYSNTGSMKKLISEELSARTSTRQNAPSIVARLMGLDMMPAETKSAAPSDKRISENTAKKYSNKRMNGSNFNSSSHIEFDSVYEAIDDDDDDDDDGWSRSFGEPRPREHPQEEELQKFKKEFEAYQAARFQECSRFAEIGSVSSRLIFQENLNKEKAAHNISMQRKVFPSKSRTLSRDFEESLMIKSYNRLGASSSPTRIVILKPGPDSIFSHEENWTSASGALPGRHSVEDFLEEVKERLKCELQGKNVTKGSEIETLRNIKPSDPKLIARQIVKQVKENVNRDSDSNSTRSYNGEVKFNGPNYPEFISRDTRSYLSDKLTNTVKSERRDDDIYEVNSRSHAFDNQRVRLKKTEGILHCANEWEISKEETEIQTGSFRHEPDNDILLHRELLSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVNVKKQKKERFNHIKERVSNFRYSFALRGRLFGKRNQSMAESHENEYRPAMTDIRSGPTVLMNCGSERHENYTEVPPSPASVCSSVHEDFWRRSEYLSPISTPDVSSRDDTVMPQVFRDISSGLNELRRQLNQLDSDDVDVEDFSMKHEPSESELMQINDPSESYIRDLLLASGLYFGSWDKSLLRGDTYAKPIGNSVFEEVEESHKNLIKENDVNFTKDQSESSHKILLDLLNEALSDVLGPPSTLSRFRKKLCKSSMLSPPQGKELLKLVWENIRVSLHPSSDISHYSVDTLVAQHLSSIPWSGIINDEINILGREVECLITKDLVEELTKDLL 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06334 842 MobiDBLite consensus disorder prediction 108 139 - -
Vifa1g06334 842 MobiDBLite consensus disorder prediction 154 180 - -
Vifa1g06334 842 MobiDBLite consensus disorder prediction 164 180 - -
Vifa1g06334 842 Pfam Domain of unknown function (DUF4378) 670 836 IPR025486 -
Vifa1g06334 842 Pfam DUF761-associated sequence motif 91 109 IPR032795 -
Vifa1g06334 842 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 230 841 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06334 74 841 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.551 6.82e-143 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06334 - - gmx:100789616 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06334 1 987344220 987347198 Vifa1g06334 1 987344220 987347198 ECH