Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06315 ATGTTGAGTTCTACCATAACACTTTCTGCACTCTTTTTTTTACTATTCATAATCTTCAAAATCCACCACCATAGAAATAAATGTTGCAAATACCCCATTTTAATAGATTATCCTTTTCTAGGCATGTTACCAGCAGTTCTTTGGAAGTTATGGAATTTTCATGATTTCATAACTGAGGAATTGAAAAAACACCATAGATGCACTGCTGAGTTCATGGGGCCTTGGTTTACCAACATGAACTATTTGGTTACTAGTGATCCCATCAACATGCATCACATTCTTAGCAAGTGTTTTGACAATTATGTGAAAGGTCGCGATTTTCGTGATATTTTTGAAGCTTTTGGAAATGGGATCTTTGTCGCAGATTCGGAGACATGGAAATACAATAGATCTCTTTTTCACTCTCTTTTCAAACAAAGAGGCTTTGAGTTTTTCCAAGAGAAAATTATTCAAAATAAGTTAGAAAGAAGCTTGATTCCATTGTTGGATCATCTACAACAACAAAGTTCAGTGGTAGATTTACAAGATGTATTCAATCGCTTCACATTTGACAACATTTGTTCAATAATTCTCGGATGTGATCCCAATTGTCTTTCCATTGAACTTCCTGACGTTGCTTGTGAGAAGGCTTTTGACCAAATTGAAGAATGCATATTCTACAGGCATGCTATGCCAAAGAGTTTTTGGATGTTTCAAAAACTACTTCAAGTTGGCCAAGAGAAAAAAATGACAAAAGCATACAAAGAATTTGATCAATTTATATATGCTAGTATAGAGTCCAAAAGAGAGGACTTAAAAAAGGGTGTAACTAATATTGAAACGGAAGACTTGTTAACAATTTTGATGAGAGACCAGAAAGGGTCGCAAGTTGTAGTTCATGATGATAAGTTTTTGAGGGATGCTGCTTTCAATCTCTTTGTAGCAGGAAGAGATACAATAACTTCAGCACTAACATGGCTCTTTTATCTTATTGCTACACATCCTTTAGTAGAAGACAAAATTCTTGAAGAGATTAAAGAAAATTTTGGGACTATTAATATTGAAAAGAAGTTAGGGGTTGATGATATGAAAAAGCTAATTTATCTTCATGGTGCTATATGCGAGGCTGTAAGACTTTTTCCTCCAATACCCTTTGCGACAAAGCAAGCAATCAAAGCTGATATACTTCCAAGTGGCCACATTGTTAATCCTAATACAACCATACTATTTTCTATGTATTCAATGGGGAGATTTGAAGATGTATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGAGGCATTGTTTATGAACCATCCTATAAGTTCATTAGTTTTAATGTCGGACCTAGAACTTGTTTGGGAAAAGACTTGTCGTTCATTCAAATTAAGATGGTAACTGTTGCTATTTTGTGCAAATATCATATCCAAGTAGTGAAAGGTCATGTTCCTATCCCAAATCATTCAATTGTACTTCTTATGAAGAATGGTTTGAAGGTAAGGTTAGCAAAAAGAGAGATTTGA 1521 0.3485 MLSSTITLSALFFLLFIIFKIHHHRNKCCKYPILIDYPFLGMLPAVLWKLWNFHDFITEELKKHHRCTAEFMGPWFTNMNYLVTSDPINMHHILSKCFDNYVKGRDFRDIFEAFGNGIFVADSETWKYNRSLFHSLFKQRGFEFFQEKIIQNKLERSLIPLLDHLQQQSSVVDLQDVFNRFTFDNICSIILGCDPNCLSIELPDVACEKAFDQIEECIFYRHAMPKSFWMFQKLLQVGQEKKMTKAYKEFDQFIYASIESKREDLKKGVTNIETEDLLTILMRDQKGSQVVVHDDKFLRDAAFNLFVAGRDTITSALTWLFYLIATHPLVEDKILEEIKENFGTINIEKKLGVDDMKKLIYLHGAICEAVRLFPPIPFATKQAIKADILPSGHIVNPNTTILFSMYSMGRFEDVWGKDCLEFKPERWISERGGIVYEPSYKFISFNVGPRTCLGKDLSFIQIKMVTVAILCKYHIQVVKGHVPIPNHSIVLLMKNGLKVRLAKREI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06315 506 CDD CYP86A 70 497 - -
Vifa1g06315 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vifa1g06315 506 Pfam Cytochrome P450 48 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PANTHER CYTOCHROME P450 22 499 - -
Vifa1g06315 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06315 506 Gene3D Cytochrome P450 18 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06315 Vifa-Chr1 986163979 986165499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06315 6 505 Cytochrome P450 AT2G23180 44.510 2.30e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06315 - - aprc:113867564 678.322