Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06310 ATGTTGGGTTCTACAACAATATCTTGTGCACTCTTTTTCTTTCTATTCATCATCTTCAAAATCCACCATAGAAGAAAATGTTGCAAATATCCCATCTTTAGAGATTATCCTTTTCTAGGCATGTTACCAACCATCCTTTGGAACTTATGGAATATTCATGATTTCATAACCAAAGAATTGAAAAAGCACCATAGAGGCACTGCTGAGTTCTTGGGACCATGGTTTACCAACATGAACTATTTGATCACTAGTGATCCCATCAACGTGCATCACATTATGAGCAAGTGTTTTGACAACTATGTTAAAGGTTCTGAGTTTCGTGATATTTTTGAAGCCTTTGGAGATGGGATATTTGTCGCGGATTCGGAGACATGGAAATATAATAGGTCTCTTTTTCACTCAGTTTTCAAACAAAGAGGCTTTGAGCTTTTTCAAGAGAAAATCATTCAAAACAAGGTGGAAAGAAGCTTGATTCCTTTGTTGGATCATGTACAAGAACAAGAGTCGGTGGTGGATTTACAAGACGTATTCAATCGTTTCACGTTTGATAATATTTGTTCTGTAATTCTTGGATGTGATCCTAATTGTCTTTCCATTGAGTTTCCTGATGTTGCTTGTGAGAAGGCTTTTGACCAAATTGAAGAATGCATATTCTATAGGCATGCTACGCCAAAAACTTTTTGGATGTTTCAAAAGCTTCTTCAAGTTGGTCAAGAGAAAAAAATGACAAAAGCATATAAAGAGTTTGATCAATTTATATATGCAAATATAGAGTCCAAAAGAGAGGAGCTAAAAAGAGCTGGAAGAGATACTATCACTTCAGCACTTACATGGCTCTTTTATCTTATTGCTACACATCCTTTAGTAGAAGCCAAAATTCTTGAAGAGATTAAAGAAAACTTTGGGGCCATTGATATTGGAAAAAAACTAGGAGTTAATGAAGTGAAAAAACTAGTTTATCTTCATGGTGCTATATGTGAGGCTGTGAGACTTTATCCTCCTATACCTTTTGAGAGAAAGCAAGCAATCAAAGATGATATACTTCCAAGTGGTCATCTTGTTAATTCGGGTACAATTATACTGTTTTCTTTGTATTCGATGGGGAGATTTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGAGGCATTGTTTATGAACCATCTTATAAGTTCTTTAGCTTTAATGCTGGACCTAGGACTTGTTTGGGAAAAGACTTATCGTTCATTCAAATTAAGATGGTAGCAGTTGCTATTTTGAGTAACTATAGTATCCAAGTAGTGAATGGTCATATTCCTATACCAAATCTTTCAATTGTACTTCTTATGAAGAATGGTTTGAAGGTTAGGATCAGAAAGAGAGAAAATTGA 1398 0.3548 MLGSTTISCALFFFLFIIFKIHHRRKCCKYPIFRDYPFLGMLPTILWNLWNIHDFITKELKKHHRGTAEFLGPWFTNMNYLITSDPINVHHIMSKCFDNYVKGSEFRDIFEAFGDGIFVADSETWKYNRSLFHSVFKQRGFELFQEKIIQNKVERSLIPLLDHVQEQESVVDLQDVFNRFTFDNICSVILGCDPNCLSIEFPDVACEKAFDQIEECIFYRHATPKTFWMFQKLLQVGQEKKMTKAYKEFDQFIYANIESKREELKRAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGAIDIGKKLGVNEVKKLVYLHGAICEAVRLYPPIPFERKQAIKDDILPSGHLVNSGTIILFSLYSMGRFEETWGKDCLEFKPERWISERGGIVYEPSYKFFSFNAGPRTCLGKDLSFIQIKMVAVAILSNYSIQVVNGHIPIPNLSIVLLMKNGLKVRIRKREN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06310 465 PANTHER CYTOCHROME P450 21 458 - -
Vifa1g06310 465 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 CDD CYP86A 69 456 - -
Vifa1g06310 465 Gene3D Cytochrome P450 267 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 SUPERFAMILY Cytochrome P450 22 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 Gene3D Cytochrome P450 16 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 Pfam Cytochrome P450 43 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 Pfam Cytochrome P450 267 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Vifa1g06310 465 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g06310 465 PRINTS E-class P450 group I signature 276 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06310 Vifa-Chr1 985660040 985661557 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06310 6 465 Cytochrome P450 AT2G23180 43.945 4.40e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06310 - - gmx:100779590 639.802