Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06301 ATGTGGCTCTTGTATGGAGGTTTTTCCATGGCTGCAACTGAAAATGATATTGATAACAGTTCAAGAACACTTGATGAGACACCAACATGGGCTGTTGCTGCTGTTTGCACTGTTTTCATCTTGATATCCATTGCTCTTGAGAAGACTCTTCATAAATTAGGAACGTGGTTAGGAAAAAGACAAAAGAAGGCTTTGCTTGAAGCTCTAGAGAAGGTCAAGGCTGAATTAATGATATTAGGATTCATTTCACTTCTATTGACTATTGGACAAAATTACATTGTCAGAATATGTATTTCTGAACTAGTTGCAAACAAAATGTTGCCATGTCCACATAAATATATAAGTGGTAACAAAGTTTCAAGTATAGAAGAGAAACAAATCAGAAAACACAGATATTTATCAGTTGAAACTACCTCCTACAAATGCAGCACCAAGGGACATGAACCACTTTTATCTGTGAATGGACTTCACCAGTTACATATTCTCATATTCTTTCTAGCAGTCTTTCATGTATTTTATAGTGCTGTCACAATGCTTCTTGGAAGACTAAAGATACGAGGATGGAAGACATGGGAGGAAGAATGTTCGAGTAACGGTTATGATTTTGCTAATGATGCTACAAGATTTAGACTCACTCATGAAACATCATTTGTGAGAGCTCATACAAGCTTTTGGACTAGGGTTTCTATCTCTTTCTATATTGGATGCTTTTTTAGACAATTTTATAGATCTGTACGCAAGGTAGATTATCGGACTTTGCGCAATGCATTTATTAGTGTGCACATAGCTCCAGGAAGTAAATTTAATTTCCAAAAATATATCAAAAGATCATTAGAAGATGACTTCAAGATAGTTGTGGGAGTAAGTCCTGTCCTCTGGGCATCAGCTGTAGTTTTCCTGCTCCTAAATATTGATGGATGGCGCACTCCATTATGGGCATTTTTAATTCCAATTATTATAATTTTGGCTGTTGGAACAAAACTTCAAGTAATATTAGCAAGAATGGCTCTTGAAATCACAGACAGACATGTAGTTGTACTAGGAATGCCTCTTGTTCAAAGTTCAGACAGATACTTTTGGTATAATCAACCTCAGTTTCTTCTTCATCTTATCCATTTTGCTTTGTTCCAGAATTCATTTCAAATAACATATATCTTGTGGACATGGTATTCTTTTGGGAAGGAAAATTGTTTGTGTTTGAATCACAAACTTACTATTATGAAAGTAGTTTGTGGGATTGTGATGTTATGCCTTTGCAGCTACATTACACTTCCATTATACGCTCTTGTAACTCAGATGGGTTCTAGGATGAAAAGATCAATATTTGATGAACAAACATCGAAAGCGTTAAAGAAATGGCATATGACTGTGAAAAAGAAGCATGGAGTTGTGAAGCTAGGGAAGTCCAAAATAGTAAGCATGGATGGTAGTAGCACCATTGGATCAACAATGCAGTCTCCTAGTCCAGCACTTCATCGTTTCAAAACTACTGGTCATTCAACAAGATCTTCAACCTTTGAGGAACAAGATGAATATGAGTTATCTGATCATGAATTGGAAACTAACTTGATTCTAAGAGTTGATGAAGACCAAGAAGTAGAAGATGTGCGTCATAGTGAAGGAGAAGCTAATAATGAACATGACTTGAATTTTTTCAAGCATACCATTAAAAGCTTAGTTTAA 1683 0.3571 MWLLYGGFSMAATENDIDNSSRTLDETPTWAVAAVCTVFILISIALEKTLHKLGTWLGKRQKKALLEALEKVKAELMILGFISLLLTIGQNYIVRICISELVANKMLPCPHKYISGNKVSSIEEKQIRKHRYLSVETTSYKCSTKGHEPLLSVNGLHQLHILIFFLAVFHVFYSAVTMLLGRLKIRGWKTWEEECSSNGYDFANDATRFRLTHETSFVRAHTSFWTRVSISFYIGCFFRQFYRSVRKVDYRTLRNAFISVHIAPGSKFNFQKYIKRSLEDDFKIVVGVSPVLWASAVVFLLLNIDGWRTPLWAFLIPIIIILAVGTKLQVILARMALEITDRHVVVLGMPLVQSSDRYFWYNQPQFLLHLIHFALFQNSFQITYILWTWYSFGKENCLCLNHKLTIMKVVCGIVMLCLCSYITLPLYALVTQMGSRMKRSIFDEQTSKALKKWHMTVKKKHGVVKLGKSKIVSMDGSSTIGSTMQSPSPALHRFKTTGHSTRSSTFEEQDEYELSDHELETNLILRVDEDQEVEDVRHSEGEANNEHDLNFFKHTIKSLV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06301 560 Pfam Mlo family 22 486 IPR004326 GO:0006952|GO:0016020
Vifa1g06301 560 PANTHER MLO-LIKE PROTEIN 1 20 503 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06301 Vifa-Chr1 985092804 985100822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06301 9 518 MLO family AT2G17480 60.735 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06301 K08472 - gmx:100790155 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06301 1 985092804 985100822 Vifa1g06301 1 985092804 985100822 ECH