Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06284 ATGAATACGTCGTCGTTTATGGACAAGCAGATAATGGATCTGAATCTCAGTCACGGATCTTCCACCAACGATTTCATCGACCTAATCAAGCTTCGTCATCACGAACAACAACAACAACAACAACAATCACTTCATGATGACGATGAACAAGAACAAGAACAACAACACGAAGAAAACTATTCATCTTCCACTCACAATAACGGAATCAAAACTGACGATATCGTTCCTAGCTACGATTTTCAACCGATTCGTTCACTTCCAGATTCTTCCCCCAATTTCGGTTACTCTAAAAAGTACAATTCTATGGATTCTTTTGAACCTGCAAAGGTGACTGTAGAAAAAGACCGAAGTGCTGTTGATGCAGCAATTTTGTTAGAGATTGATCGAACAATGAAGAAACATATGGACAATTTGCATCATGTTCTGGAAGGTGTTAGTGCCCGGTTAACACAGCTAGAAACCAGAACTCACCATCTTGAGAGCTCTATGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGGATCACTGATGGGAAATTGAGGCTGCTGGAGAATATTCTTTCTGAGGTGCAAACAGGGGTGCTAGATATCAAGGACAAACAAGATATCGTGCAAGCTCAGCTGCAACTTGCAAAACTGCAAGTGTCCAAGACAGAGCAACAATCAGAAACCCAAACTAGTGCAGTGTCAAATCCTGCGCAGCAAGCTTCATCTGCTCCCCAACAATCTCAACATCATCTTCCTTCATCTTTTAACCTTCCACAATCAACTCCTGTGGTTTCTCCTCCTAATGCACCTCCTCAACCGGGTTTGCCACCTCAGGTTCAACTTCTCAATCAATACTCACAGATCCCAAACCCAGCTGTTCCTCAGAGAGATCCATACATGCCACCACCTGTTCATTCTCAGGAAATCCCAAATCAGCAGTATCAGCAGCCGCATCCTCAACCAGGGGCACCTCCACATCAACAATATCAGCAGACCCCTCTTCCTCAGTACTCTCAGCCAGCACATCATCTACCTCAACAGATGCCACCACTTTCATCCGGAAATCCACCTCAACTGCAATCTTCCATGGGTCACCACCATCTAGAAGAACCATCTTATGTTCCTTCTCAGAGTTATCCTCCCAATCTCCGCCAACCACCATCTCAGCCACCCAGTGGACCCCCTCCACCTGCCCAGCAATTCTACGGGACACCACCCCAAGGATATGAATCACCATCAAATAGATCTGCTTCAAGTTATTCTTCTGGATATGGTACATTATCTGCACCTGCTGAGCCATATCGATATGGTGGTCCACCTCAGTATGGTGGTAAACAACCACAACTACCTAGTGCCTCTGTGGCTTCCAGTGGTGGAACTGGTTACCCACAGCTCCCAACTGCCCGCGCTCTCCCACAAGCAATACCTACCGCATCATCTGTAAGTGGTGGCTCAGGTTCTTCTGGAACTGGTAACAGGGTTTCTGTTGACGACGTAGTTGAAAAAGTTGCTACTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTACGGAAGCTGACAGAGAATGGTCAATCAGTTGACCTAAATACAGTGCTGGATAAACTTATGAATGAAGGTGGTGGTGATATGCAGCAACAAAGGGGTTGGTTTGGTAGGTAA 1653 0.4543 MNTSSFMDKQIMDLNLSHGSSTNDFIDLIKLRHHEQQQQQQQSLHDDDEQEQEQQHEENYSSSTHNNGIKTDDIVPSYDFQPIRSLPDSSPNFGYSKKYNSMDSFEPAKVTVEKDRSAVDAAILLEIDRTMKKHMDNLHHVLEGVSARLTQLETRTHHLESSMDDLKVSVGNNHGITDGKLRLLENILSEVQTGVLDIKDKQDIVQAQLQLAKLQVSKTEQQSETQTSAVSNPAQQASSAPQQSQHHLPSSFNLPQSTPVVSPPNAPPQPGLPPQVQLLNQYSQIPNPAVPQRDPYMPPPVHSQEIPNQQYQQPHPQPGAPPHQQYQQTPLPQYSQPAHHLPQQMPPLSSGNPPQLQSSMGHHHLEEPSYVPSQSYPPNLRQPPSQPPSGPPPPAQQFYGTPPQGYESPSNRSASSYSSGYGTLSAPAEPYRYGGPPQYGGKQPQLPSASVASSGGTGYPQLPTARALPQAIPTASSVSGGSGSSGTGNRVSVDDVVEKVATMGFPRDHVRATVRKLTENGQSVDLNTVLDKLMNEGGGDMQQQRGWFGR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06284 550 MobiDBLite consensus disorder prediction 34 58 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 326 359 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 223 464 - -
Vifa1g06284 550 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 549 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 377 399 - -
Vifa1g06284 550 Pfam UBA-like domain (DUF1421) 493 536 IPR010820 -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 401 423 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 472 491 - -
Vifa1g06284 550 Coils Coil 204 224 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 260 274 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 443 460 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 34 91 - -
Vifa1g06284 550 MobiDBLite consensus disorder prediction 223 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06284 Vifa-Chr1 982168115 982170163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06284 1 297 Trihelix Transcription Factor Family AT5G14540 40.909 1.09e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06284 - - gmx:100777464 591.267