Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06231 ATGATCTTTGCTAAAATCGCTTCCTTCTACTCACAATCCTCACTTTCTTCTACTCACCCAAACAACAATCTCAGAATCTCTTCATCCCTTCAGGATTTCTCTTCTTATTCCCATTTGAAACAACAACCCCTTGAATCAGTTACACCAACAATACCAACTACTTCTCGGAAGAAATGCATCAAAGCAATCAGGCTTGTACTTTTACTCACATTGTTTCTTTTACTCACGTACGTGTTTTTTATGTTTGTTTTCTCTTTTTGGAATATTGGGTCTGGTAAATATTATGTTGTGCTTGATTGTGGAAGTACCGGAACTCGTGTTTATGTGTATAATGCTAACATTCAGTATAAGAGACATAGTAGTCTTCCTATAGCAATTAAGTCATTAGGAGATGGCTTGCGTAAGAAGAAGGCTACTGGTCGTGCTTACGATCGAGTTGAAACTGAACCTGGGATTGATAAGTTGGTTTATAATGTGTCTGGTTTGAGAACTGCTTTGAAACCGTTGGTTAGGTGGGCGAAGAAGCAAATACCGGTTCATGCTCATAAGAGTACTTCTGTGTTCCTTTATGCTACTGCTGGTGTTAGGAAACTTCCTAGGAAGGAGTCTAAGTGGTTGTTAGATCATGCTTGGTCTGTCATCAAGGATTCTCCCTTTATGTGTAAGAAGGATTGGATTAAGATTATTTCTGGTACCGAGGAAGCTTATTTTGGATGGATTTCGCTTAATTATCATAGTGGTATTTTGGGTGTTACTCCTAGGAAGGCGACTTATGGTGCACTTGACTTGGGGGGATCGTCGTTGCAGGTTACTTTTGAGAGTGATCAACAAATTAATAGTGAAACTAGTTTGTATGTTAGGATTGGATCGGTGAATCACCATCTTACTGCCTATTCTCTTGAGGGTTATGGTCTCAATGAGGCGTTTGGGAAGTCTGTGAAGCTTCTGTTTCAGAAAGAGTTTGGATCATTAGCCAATGCAGATATGGCTGGTAAAGATATAGAGCTCAAGCATCCTTGTTTGCAGTCTGGATACAAGGGTCAGTATGTGTGCTCTCGTTGTGACAAAAGTGGAAGTATTGGTGATGAGAAACAGTTGAGTAAGCAAGGAGGGCCGGGAACTCCGTTAGTGCTTGTTGGTGCTCCTAATTGGCAGCAATGCAGTGCACTTGCGAAAGTTGCCGTCAATTTGTCTCAATGGTCAAATCTCAGTCCAGGACTTGATTGCGGAGTGATGCCATGTGCTTTGCGAGATAATTTACCTCGTCCATATGGCCACTTTTATGTGATTTCTGGTTTTTATGTTGTATATCGGTTTTTCAACTTGACTTCCGATGCCACACTTGATGATGTGTTGAAAAAGGGTGAAGAATTTTGTGAAAAAAGATGGGACGTTGCCATGAAAAGTGTTGTGCCTCAGCCCTTTATTGAGCAGTACTGCTTCAGGGCACCGTACATTACTTCACTACTAAGAGAAGGTTTGCACATTAATGATAACCAAATTTCTGTTGGATCTGGCAGCATCACTTGGACACTTGGGGTTGCCTTGTTAGAAGCTGGGAGGGCATATTCCACTGGATACGGCCTTCGTAACTTTGAATTGTTCCAGATGAAAATAAATCCTCTTATTCTTATTGCCATTCTGTTGTTTTCTTTTATTGTCCTTCTTTGTGCTTTATCATTAGTTGGCAATTCGAATTGGATGCCAAGGTTTTTCCGGAGGCAATATCTTCCAATGTTCAGGCATGACACTGTTTCCGGTGCTTCTGTTCTTAATATTCCATCTCCATTTAGGTTTCAACGATGGAGTCCAATGAGATCTGTTGATGAAAGAGTAAAGATGCCGCTCAGCCCAACAGTTGCAGGTTCACGTGGAAGCCCATTTGGCCTGGGGCGTGGGTTTGGTGATAACAATGGTGGCATCCAGCTTGTCGGGTCTTCTTTGTACCCATCATCTAGTGGTGTCTCACATAGTTATTCTTCAAATAGTTTAGGGCAGATGCAGTTTGACAGCAGCGGGTTAAGATATCATTTTCTGGAAATATTGGTTTTTGTCATGGAGATAACTGAAGCTGAAGATGCATGTAGTCTGATCAGTTGA 2100 0.4133 MIFAKIASFYSQSSLSSTHPNNNLRISSSLQDFSSYSHLKQQPLESVTPTIPTTSRKKCIKAIRLVLLLTLFLLLTYVFFMFVFSFWNIGSGKYYVVLDCGSTGTRVYVYNANIQYKRHSSLPIAIKSLGDGLRKKKATGRAYDRVETEPGIDKLVYNVSGLRTALKPLVRWAKKQIPVHAHKSTSVFLYATAGVRKLPRKESKWLLDHAWSVIKDSPFMCKKDWIKIISGTEEAYFGWISLNYHSGILGVTPRKATYGALDLGGSSLQVTFESDQQINSETSLYVRIGSVNHHLTAYSLEGYGLNEAFGKSVKLLFQKEFGSLANADMAGKDIELKHPCLQSGYKGQYVCSRCDKSGSIGDEKQLSKQGGPGTPLVLVGAPNWQQCSALAKVAVNLSQWSNLSPGLDCGVMPCALRDNLPRPYGHFYVISGFYVVYRFFNLTSDATLDDVLKKGEEFCEKRWDVAMKSVVPQPFIEQYCFRAPYITSLLREGLHINDNQISVGSGSITWTLGVALLEAGRAYSTGYGLRNFELFQMKINPLILIAILLFSFIVLLCALSLVGNSNWMPRFFRRQYLPMFRHDTVSGASVLNIPSPFRFQRWSPMRSVDERVKMPLSPTVAGSRGSPFGLGRGFGDNNGGIQLVGSSLYPSSSGVSHSYSSNSLGQMQFDSSGLRYHFLEILVFVMEITEAEDACSLIS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06231 699 Pfam GDA1/CD39 (nucleoside phosphatase) family 92 517 IPR000407 GO:0016787
Vifa1g06231 699 Gene3D Exopolyphosphatase. Domain 2 231 505 - -
Vifa1g06231 699 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 64 520 IPR000407 GO:0016787
Vifa1g06231 699 Gene3D - 88 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06231 Vifa-Chr1 974614496 974617233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06231 22 673 Nodulin-like Gene Family AT4G19180 57.567 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06231 - - adu:107487370 941.414