Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g06214 | ATGGCTCCGAAGCAGCAAAGTACTGGTCTTTTTGTAGGATTGAACAAGGGTCATGTTGTTACCAAGAAGGAGTTGGCTACACGACCCTCCAGTCGTAAAGGGAAAACTAGCAAGCAGGTCCATTTTGTGAGGAATCTCATCCGTGAGGTTGCAGGTTTTGCGCCTTACGAAAAGCGTATAACTGAGTTATTGAAGGTTGGAAAAGACAATAGGGCACTTAAAGTTGCCAAGAGAAAGCTTGAAACCCATAAACGCGCAAAGAAGAAGCGCGAGGAGATGTCTAATATTCTTAGAAAGGGAGCGGTGGTGTGGTGTAGCTCGTTCGACATAAGTGGGTTGGAATCGTTTGCTTTAGAAGTCATTTCAGATGGATTTTTTAGCGTGAGATGA | 390 | 0.4436 | MAPKQQSTGLFVGLNKGHVVTKKELATRPSSRKGKTSKQVHFVRNLIREVAGFAPYEKRITELLKVGKDNRALKVAKRKLETHKRAKKKREEMSNILRKGAVVWCSSFDISGLESFALEVISDGFFSVR | 129 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g06214 | 129 | Coils | Coil | 73 | 93 | - | - | |
Vifa1g06214 | 129 | PANTHER | 60S RIBOSOMAL PROTEIN L36 | 1 | 99 | IPR000509 | GO:0003735|GO:0005840|GO:0006412 | |
Vifa1g06214 | 129 | FunFam | 60S ribosomal protein L36 | 1 | 103 | - | - | |
Vifa1g06214 | 129 | Gene3D | 60S ribosomal protein L36 | 1 | 103 | IPR038097 | - | |
Vifa1g06214 | 129 | Pfam | Ribosomal protein L36e | 8 | 99 | IPR000509 | GO:0003735|GO:0005840|GO:0006412 | |
Vifa1g06214 | 129 | ProSitePatterns | Ribosomal protein L36e signature. | 55 | 65 | IPR000509 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g06214 | Vifa-Chr1 | 971331280 | 971331669 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g06214 | 1 | 99 | Cytoplasmic Ribosomal Protein Gene Family | AT3G53740 | 79.798 | 5.00e-51 | 155 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g06214 | K02920 | - | cave:132189827 | 181.8 |