Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06155 ATGCCGGAAGGAGGAAGAAAGAGGATACATTTTAGCAAACTATATTCATTTTCTTGTTTCAAATCGTCATTTAAAGAGGGACATTCACAAATTGGTGGAAAAGGGTATTCAAGAGTTGTTTATTGTAATGATCCTGATAATGTTGAAGCAATTCAGTTGAGTTATGATGGAAACTATGTTTCAACTACCAAGTATACAGCTTTTAATTTTATACCAAAGTCATTGTTTGAGCAGTTCAGAAGGGTTGCAAATATCTACTTTCTTATTGTTGCTTGCGTTTCGTTTAGTCCTTTGGCACCTTATACTGCTTTAAGTATCGCTGCGCCTTTGATGGCTGTTATTGGTGCTACTATGGCCAAAGAAGCTGTGGAAGATTGGAGAAGAAGAAGACAGGATATAGAGGCAAACAACAGAAAGGTTCAGGTATATGGTAAAAACTATACATTCGGGGAGACGAGATGGAAGAAACTTCGTGTCGGTGATGTGATTAAAGTGTACAAAGATGAATACTTTCCTTCTGATCTTCTTCTGCTTTCATCAAGCTACGGGGATGGTGTTTGCTATGTCGAGACAATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCATGCATTAGATGCGACAACCCGTCTTAACGATGAAGAATCTCTGCAGAAGTTTAGAGCTATGGTCAAATGTGAGGATCCTAATGAAAATCTATACTCATTTATTGGAACTTTGAATTACGAGGGTGTGGAACATCCTCTTTCGTTGCAGGAAATCCTTTTACGAGATTCTAAGCTGAGAAATACCGAATATATCTATGGTGTTGTTATCTTTACTGGCCATGATACAAAAGTAATGCAGAATTCCGTTGATCCTCCGTCAAAGAGGAGCAAAATCGAAAGAAAAATGGATAAGATAATCTACATTCTCTTCAGTACTTTGATTTTGATATCGTTTATCGGTTCTTTGTTTTTCGGTGTCGAGACCAAAAGGGATATTAGAAGTGATGGAAGTTACAGAAGATGGTATCTTCATCCAGATGAGTCAACAATATATTACGATTCTAGAAGGCCAGGCCTCGCTTCGATTCTTCACTTTTTGACTGCACTTATGCTTTATGGTTATCTAATTCCGATATCACTTTATGTGTCGATAGAACTTGTGAAAGTTCTGCAGTGTATTTTCATCAACCAAGATCAGGAAATGTATTTTGAAGAATCGGATCGGCCAGCTCACGCGCGGACGTCTAATTTGAACGAAGAACTAGGTCAAGTTGATACCATATTGTCTGATAAAACCGGTACTTTGACATGTAACTCTATGGAGTTCGTCAAATGTTCCGTTGGGGGTACTCAGTATGGCCGTGGTATTACCGAAGTGGAGAAGGCACTTGCTAGGAGAGCGAAGGGTGGAGAATCTGAAGGTGATGCGTATTCATCGGATATCTTGAGTAAGAGTAGCAAGGCTGTGGAATCTCAGAAACCAATTAAAGGCTTTAACTTTAAAGATGAGCGAATAATGAACGGACTATGGATTCACGAACCACATCCGGACATCATAGAGAAATTCTTTCGAGTTTTAGCTATATGTCATACAGCAATTCCCGATGTAGATAAAAAGTCGAGGGAAATTTTGTATGAAGCCGAGTCGCCAGATGAAGCAGCATTTGTCATAGCTGCAAAGGAGCTTGGTTTTGAGTTTTTTGCTCGGACACAAACTAGCATTTCGTTGCATGAACTCAATCATGAAAACGGAAAAAGGGTTAACAGAGTGTACCAGCTTCTGCATATCTTAGAGTTCAGCAGTTCACGCAAAAGAATGTCGGTGATAGTGAGGAACGAGGAAAATAAAATATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTTGAAAGGCTCTCGGAATATGGAAGAAAGTTTGAGGCTGAAACCAATAATCATATCAAAAAATATTCCGAGGCAGGTTTAAGAACTCTCGTAATCACATACCGTGAACTCGGCGAAGAAGAATATAACCAATGGAACAAGGAGTTCTCGAAGGCCAAAACTTCTTTAGCAGAAGACCGAGATACACTGGTGGATGCAGCTGCTGACAAGATGGAAAGAGATTTGATACTTCTTGGAGCTACCGCAGTCGAGGATAGACTGCAAAAAGGGGTTCCTGAATGTATTGAAAATCTTGCTAAGGCAGGAATCAAGTTATGGGTATTGACCGGGGACAAAATGGAAACTGCGGTCAACATCGGGTATGCTTGTAGTTTACTTCGACAAGACATGACACAAATAGTGATTACTCTTGACTCATCGGAAATCCTATCATTGGAAAAACAAGGGAACAAGGAGGCTCTAATAAAGGCCTCTCATGATAGCATCGAGAAGCAAATTAATGAGGGAATCTTGCAAATCAAGTCAGCGAAAGAGAGTTCTTTGTCAGAAGGTTCTTCATTTGGCTTGATAATTGATGGGAGGTCCTTGGAGTATTCTCTCAACAATGCTTTGGAGAAACCATTCTTTAAGTTGGCTAGTAATTGCGCATCTGTCATTTGTTGCCGGTCTTCACCGAAACAGAAAGCTCGCGTTACGAAATTGGTGAAATTGGAAACAGGAAAGACAACATTATCTATCGGTGATGGTGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATCGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTGATGGCGAGTGATTATGCAATCGGTCAATTCCGTTTTCTGGAGCGTTTATTGTTGGTACACGGCCATTGGTGCTATAGGAGAATATCAATGATGATATGTTACTTTTTCTACAAAAACATTGCATTTGGATTCACCTTATTTTGGTTTGAAGCATATGCATCATTCTCCGGTCAAGCCGCTTACAACGATTGGTACATGTCGTGTTACAATGTGTTCTTCACTTCACTACCGGTCATCGCTCTCGGTGTTTTTGATCAAGATGTTTCTGCCAAACTATGCCAAAAGTATCCCTTTCTATATCTAGAAGGAGTAGAGAACACTCTCTTCAGCTGGCCACGGATAATCGGTTGGATGTTAAACGGAGTCATTAGTTCCTTGCTAATCTTCTTCTTAACGACTAATTCCGTCTCAAACCAAGCCTTCACAAAAGACGGTCAAGTAGTAGATTTCGAAATACTCGGTGTCATAATGTATACTTGTGCAATTTGGGTTGTGAATTGCCAAATGGCACTTTCAATCAACTACTTCACTTGGATCCAACATTTTTTCCTTTGGGGTAGTATTGCATTTTGGTACATTTTCTTGATTGTTTATGGTTACATATCTCCAACCATATCAACAACAGCTTATAGGGTATTTATGGAAGCTTGTGCTCCTAGTGCTTTATATTGGTTAGTTACTCTTTTTGTTGTTGTTTGTGTTCTTTTACCATATTTTTGTTATAGAGCTTTTCAAAGTAGGTTTCTACCAATGTATCATGATATCATACAAAGAAAACAAGTAGAAGGGGCTGAATTTGAGATAGGTGATGAGATACCTAAAAAAGTTCAAGGTAAGTTAATACATTTGAGAGAAAGGTTGAAGGAAAGGGAACCGTGA 3576 0.3951 MPEGGRKRIHFSKLYSFSCFKSSFKEGHSQIGGKGYSRVVYCNDPDNVEAIQLSYDGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPYTALSIAAPLMAVIGATMAKEAVEDWRRRRQDIEANNRKVQVYGKNYTFGETRWKKLRVGDVIKVYKDEYFPSDLLLLSSSYGDGVCYVETMNLDGETNLKLKHALDATTRLNDEESLQKFRAMVKCEDPNENLYSFIGTLNYEGVEHPLSLQEILLRDSKLRNTEYIYGVVIFTGHDTKVMQNSVDPPSKRSKIERKMDKIIYILFSTLILISFIGSLFFGVETKRDIRSDGSYRRWYLHPDESTIYYDSRRPGLASILHFLTALMLYGYLIPISLYVSIELVKVLQCIFINQDQEMYFEESDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVGGTQYGRGITEVEKALARRAKGGESEGDAYSSDILSKSSKAVESQKPIKGFNFKDERIMNGLWIHEPHPDIIEKFFRVLAICHTAIPDVDKKSREILYEAESPDEAAFVIAAKELGFEFFARTQTSISLHELNHENGKRVNRVYQLLHILEFSSSRKRMSVIVRNEENKILLLCKGADSVMFERLSEYGRKFEAETNNHIKKYSEAGLRTLVITYRELGEEEYNQWNKEFSKAKTSLAEDRDTLVDAAADKMERDLILLGATAVEDRLQKGVPECIENLAKAGIKLWVLTGDKMETAVNIGYACSLLRQDMTQIVITLDSSEILSLEKQGNKEALIKASHDSIEKQINEGILQIKSAKESSLSEGSSFGLIIDGRSLEYSLNNALEKPFFKLASNCASVICCRSSPKQKARVTKLVKLETGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDYAIGQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSCYNVFFTSLPVIALGVFDQDVSAKLCQKYPFLYLEGVENTLFSWPRIIGWMLNGVISSLLIFFLTTNSVSNQAFTKDGQVVDFEILGVIMYTCAIWVVNCQMALSINYFTWIQHFFLWGSIAFWYIFLIVYGYISPTISTTAYRVFMEACAPSALYWLVTLFVVVCVLLPYFCYRAFQSRFLPMYHDIIQRKQVEGAEFEIGDEIPKKVQGKLIHLRERLKEREP 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06155 1191 SFLD p-type atpase 407 922 IPR044492 -
Vifa1g06155 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Vifa1g06155 1191 FunFam Phospholipid-transporting ATPase 545 703 - -
Vifa1g06155 1191 CDD P-type_ATPase_APLT_Dnf-like 57 1031 - -
Vifa1g06155 1191 FunFam Phospholipid-transporting ATPase 116 286 - -
Vifa1g06155 1191 Coils Coil 116 136 - -
Vifa1g06155 1191 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Vifa1g06155 1191 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Vifa1g06155 1191 SFLD C1.7: P-type atpase like 407 922 - -
Vifa1g06155 1191 SUPERFAMILY Calcium ATPase, transduction domain A 146 283 IPR008250 -
Vifa1g06155 1191 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1149 IPR032630 -
Vifa1g06155 1191 Gene3D - 703 911 IPR023214 -
Vifa1g06155 1191 Pfam Phospholipid-translocating ATPase N-terminal 40 102 IPR032631 -
Vifa1g06155 1191 Pfam Cation transport ATPase (P-type) 543 630 - -
Vifa1g06155 1191 NCBIfam HAD-IC family P-type ATPase 843 954 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifa1g06155 1191 NCBIfam phospholipid-translocating P-type ATPase 55 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vifa1g06155 1191 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1159 - -
Vifa1g06155 1191 FunFam Phospholipid-transporting ATPase 702 911 - -
Vifa1g06155 1191 SUPERFAMILY HAD-like 420 926 IPR036412 -
Vifa1g06155 1191 Gene3D - 533 702 IPR023299 GO:0000166
Vifa1g06155 1191 Gene3D - 108 286 - -
Vifa1g06155 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1149 IPR023298 -
Vifa1g06155 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 669 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06155 Vifa-Chr1 962027244 962032616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06155 1 1162 Primary Pumps ATPases AT1G68710 62.615 0.0 1570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06155 K01530 - gmx:100817020 1980.3