Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06134 ATGAATTCTAGGAGATTAATTCATTTACTTTGGTGTTTCAATCTGTATGTAGCATCTACATTCATTCAAGTTTCAACTGAAAAGAATGTCTATGATTCAAAGAAATGTGTGAAACCTCCTAACGGCATAAGCTTTTTCGGAAGCCTCTCGGGAAGAGCTTCCGATGGTCGTCTCATCATCGATTTTATCAGTGAAGAGTTGAAGCTACCATATCTAAGTGCATATTTGAACTCAGTTGGATCAAATTACAGACATGGTGCAAACTTTGCAGTAGGAGGCGCGTCTATTCGTCCTGGCGGTTATAGTCCAATCAACCTTGGTGTTCAAGTATCTGAGTTTGTTTTGTTCAAATCACACTCCAACATTCTCTTCAATCAACTCTCTAACAACAGGACAGAACCGCCTTTTAGAAGCGGTCTTCCGAGGAATGAGGATTTCTCTAAGGCTCTTTACACCTTTGATATTGGACAAAATGATATTGCCATCGGTTTGCAGCACACTTCTGAGGAACAGGTTAAAAGCTCAATTCCTGATATCTTGAGTCAGTTCGCCCAAGCAGTGCAGGATCTATACAATGAAGGTGCAAGGGTGTTTTGGATTCACAATACAGGTCCAATTGGATGCTTGCCCTATGATATAATCTATTATCAACACAAGAATGGTAACTTGGATGCAAATGGCTGTGTTAAACCTCACAATGAGATTGCTCAGGAATATAACAGGAAGCTAAAAGACCAAGTGTTTCAGCTAAGGAGAAAGTTTCCATTAGCCAAGTTTACATATGTTGATGTTTACGCAGCCAAATATAAACTTATCAGCAATGCAAAAAACCTAGGTTTTGTGAATCCTATGGAGTTTTGCTGTGGAAGCTACTACGGTTACCATATAAATTGTGGGAAGAAGGCGATAATAAATGGAACAGTTTATGGAAATCCATGTAATAATCCTTGGCAACATATTAGTTGGGACGGTATACATTACTCCCAAGCAGCAAATCAATGGATTGCTAAACAAATTCTGTATGGATATCTATCTGATCCGCCAGTTTCAGTCGCGAAGGCATGTCGTACATGA 1074 0.3939 MNSRRLIHLLWCFNLYVASTFIQVSTEKNVYDSKKCVKPPNGISFFGSLSGRASDGRLIIDFISEELKLPYLSAYLNSVGSNYRHGANFAVGGASIRPGGYSPINLGVQVSEFVLFKSHSNILFNQLSNNRTEPPFRSGLPRNEDFSKALYTFDIGQNDIAIGLQHTSEEQVKSSIPDILSQFAQAVQDLYNEGARVFWIHNTGPIGCLPYDIIYYQHKNGNLDANGCVKPHNEIAQEYNRKLKDQVFQLRRKFPLAKFTYVDVYAAKYKLISNAKNLGFVNPMEFCCGSYYGYHINCGKKAIINGTVYGNPCNNPWQHISWDGIHYSQAANQWIAKQILYGYLSDPPVSVAKACRT 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06134 357 Pfam GDSL-like Lipase/Acylhydrolase 45 339 IPR001087 GO:0016788
Vifa1g06134 357 Gene3D SGNH hydrolase 21 342 IPR036514 -
Vifa1g06134 357 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 29 343 - -
Vifa1g06134 357 SUPERFAMILY SGNH hydrolase 145 340 - -
Vifa1g06134 357 CDD SGNH_plant_lipase_like 33 343 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06134 Vifa-Chr1 958017552 958019198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06134 40 340 Pollen Coat Proteome AT1G75910 29.073 9.55e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06134 - - gmx:100782272 579.326