Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06118 ATGGAGAGCACAAGATTAGGCCAATGGTTAAAGCTAAATCTTCTGGTGTTTGTACTGGTATTGCTCAAGGCAGAAGCAGTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTAGATAGAGGATTTGGAAAAGGAAATAACAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAACAATATCACTACTTGCCTTGGGCGTAAAATGAATCGTTTAGGTTCATCAAAGCGAATGGCTAATCAAATTGCCTTTTCAGGAATTTTGAATAACAGGAGATTGTTCAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGATACTGCGATGGTTCATCTTTTACTGGTGATGTGGAAGCTGTAAATCCGGTAACAAAGTTGCACTTTAGAGGAGCAAGAGTTTTTAATGCTGTCATGAAAGATTTGCTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATTTCAGGATGTTCAGCTGGTGGTTTAACTTCAATACTTAATTGTGATCGCTTTCGAGCTCTTTTACCGCTAGGAGCTAAAGTGAAATGCCTCTCGGATGCTGGTTATTTTATCAACGCAAGAGATGTATCTGGAACACAGCACATTGAAGAGTTTTTCGGTCAAGTTGTTACAACACATGGATCTGCAAGGAATTTGCCGAGATCATGCACTTCAAGGCTCAGTCCAAGGCTGTGCTTTTTCCCTCAATATGTTGTATCACAAATCGCTACACCAATTTTCTTTATAAATGCGGCGTACGACTCATGGCAGATTAAGAACATTTTGGCCCCGGGTGTTGCTGATCCTCACGGACGCTGGCATAGCTGCAAGATGGATATAAACAACTGCTCTTCCAATCAACTAGATCTAATGCAAGGCTTTAGATCACAATTCCTAAGAGCATTGACTGTTCTAGGAAACTCTCCAACCAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACCGAAATGCAAGAAACATGGTTTAGAAGTGATTCTCCCTTATTGGCCAAGACAACCATTGCAAAAGCTGTAGCAGACTGGTTTTATGAAAGAAGGCTTTTCCATCAAATAGACTGTCCTTACCCCTGCAATCCGAGTTGTCACAACCGCGTTTTTCAACAAGACAATCCAGGAAAAAATGTCACCACCATCGAAGGAACTTCATCAGCTGCATCAGCTATAAAGGCCAGTTTTTCAAAACTGTCAAACAAGGCGCAATGGATTGAGCTTTTGTGCGTTAGAATCGGTTGGCTTCTATTGACGATGGTTATTCTGGTCATCCTATAA 1302 0.4094 MESTRLGQWLKLNLLVFVLVLLKAEAVCLDGSPPAYHLDRGFGKGNNSWLVQFEGGGWCNNITTCLGRKMNRLGSSKRMANQIAFSGILNNRRLFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARVFNAVMKDLLAKGMKNAQNAIISGCSAGGLTSILNCDRFRALLPLGAKVKCLSDAGYFINARDVSGTQHIEEFFGQVVTTHGSARNLPRSCTSRLSPRLCFFPQYVVSQIATPIFFINAAYDSWQIKNILAPGVADPHGRWHSCKMDINNCSSNQLDLMQGFRSQFLRALTVLGNSPTKGMFIDSCYAHCQTEMQETWFRSDSPLLAKTTIAKAVADWFYERRLFHQIDCPYPCNPSCHNRVFQQDNPGKNVTTIEGTSSAASAIKASFSKLSNKAQWIELLCVRIGWLLLTMVILVIL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06118 433 PANTHER NOTUM-RELATED 23 374 IPR004963 GO:0016787
Vifa1g06118 433 Pfam Pectinacetylesterase 23 357 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06118 Vifa-Chr1 955526528 955530351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06118 15 377 Carbohydrate Esterase AT4G19420 62.563 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06118 K19882 - gmx:100776478 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06118 1 955526528 955530351 Vifa1g06118 1 955526528 955530351 ECH