Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06116 ATGTTCGGATTTCACCGGGCTTATATGTTGGTGAAAAATTGGAACACAAACCCATGCTCTAAAGTCCAACTATATCAGTTATGTGCAGGAACCATAAATTCAAGTATTGAAACTTTCAAGTCTGTTGATAAGAAGTATCATGTTACTGATATCACGAAATCAGTTGCAGCGGCTACAGAGGAGAGTCCTTATGCTGATATTTTTCTATTGGAAATTGATCTTAGCTCTCTTGCTTCTGTACATAGATTTTGGAAGCAGAGAAAAGAGGCTTCTCAGCTTCAGACTGTGAACAAGAAACTAGCGGCAATGAACAAGTTATTGACGGAGGAAAATGATCGGTTGTAG 345 0.3855 MFGFHRAYMLVKNWNTNPCSKVQLYQLCAGTINSSIETFKSVDKKYHVTDITKSVAAATEESPYADIFLLEIDLSSLASVHRFWKQRKEASQLQTVNKKLAAMNKLLTEENDRL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06116 114 Coils Coil 93 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06116 Vifa-Chr1 955444717 955445496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06116 85 114 Homeobox Transcription Factor Family AT2G34710 83.333 1.67e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06116 K09338 - psat:127136304 57.3806