Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06104 ATGTCACATATTCTAAAGGAAACTGCTGCCACAAAATATGAAAATTTTGAAATAAATTTCATTAGGAAAAGTGTTGTAAAAGCTCTCAATCTTTCACCAAAGTCATTTTCAACAATAATTCTTTCAAATCTCGATCTACTTTCAGGTCGATTTCCTGTTACATACTTATATTTCTACAACAAACCAAAACTAGGTAACTTCGAATCTTTTATCAACACTCTTAAAATCTCTCTAGCACAAACACTAAATCATTACTATCCTTTTTCTGGCCAAATTGTTCAAAATCACCAAACCAATGAACCCGAGATCATTTGTGACAACAATGGTTCATTACTCATTGAAGCTCAAGTAAATATTCCACTAAAGAATCTAGATTTTTATAATCTCAATGAAACTCTTAGAGATAAAATAGTCTCGGTTGAACCAGATTTTCTTTCACAAATTCAGGTATCAGAATTCACTTGTGGTGGAGTTTCAATAGCATTTACTTTTGATCACGCATTAGGTGATGCAACTTCTTTTGGTAAATTCATTTCATCATGGTGTGAAATAGCACAAAATAGACCATTAGCATGCATACCGAATCATACAAGAAACCTTCACGCGCGTTCACCTCCTAAATATCAACCTTATCTGGATCAAATTTTCATCAAATGCACCATGGAAGAGATTCAAAACATGTCAATGAATAATAATATTTCGCTTAAACGTCTTTATCATATCAGCGCGTCGAGTATCAGTACCCTGCAGAGACTTTGTTCGGTTAATGGAATTAAAAGAACAAAGATTGAGGCTTTCTCTGCCTATGTATGGAAGATAATGATAAACACAATTGATCAAAACCTTCATAAGAAATGCAAGATGGGTTGGTTAGTAAATGGAAGAGATAGATTGAGTGGAAGCAAAACCATTAAGAATATTTCCATGTCGAATTACATTGGTAATGTTTTGTCTTTGGCTTTTGGTGAGGCAAGAATTCAAGAATTGAAGGAAAATTCCTTATCAGACATTGGTGAGATAGTTCATGATGCAATTTCAAAGGTTAGTAATGAAGAACATTTTTTGGATTTGATTGATTGGATTGAGTTTCATAGGCCGGGCTTGATGCTTGCGAAGGCGGTGTTAGGACAAGATGATGGACCTGTGCTGGTGGTTTCTTCAGGACAAAGGTTTCCTGTTAGTGAAGTTGATTTTGGATTTGGGAGTCCTTTGTTTGGGACAGTGTATACTTGTATTGAAAGGGTTGGTGTTGGTTATATGAATCAAAGGCAAAGTGGTAAAGGTGATGGTTCTTGGACTGTTTCTGCTATCTTGTGGCCTGAGTTTGTGGATGCTTTGAAGGATGATCCAATTTTTCAGCCCATGACTGCTTCCCATCTTCAACTTTAG 1389 0.3557 MSHILKETAATKYENFEINFIRKSVVKALNLSPKSFSTIILSNLDLLSGRFPVTYLYFYNKPKLGNFESFINTLKISLAQTLNHYYPFSGQIVQNHQTNEPEIICDNNGSLLIEAQVNIPLKNLDFYNLNETLRDKIVSVEPDFLSQIQVSEFTCGGVSIAFTFDHALGDATSFGKFISSWCEIAQNRPLACIPNHTRNLHARSPPKYQPYLDQIFIKCTMEEIQNMSMNNNISLKRLYHISASSISTLQRLCSVNGIKRTKIEAFSAYVWKIMINTIDQNLHKKCKMGWLVNGRDRLSGSKTIKNISMSNYIGNVLSLAFGEARIQELKENSLSDIGEIVHDAISKVSNEEHFLDLIDWIEFHRPGLMLAKAVLGQDDGPVLVVSSGQRFPVSEVDFGFGSPLFGTVYTCIERVGVGYMNQRQSGKGDGSWTVSAILWPEFVDALKDDPIFQPMTASHLQL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06104 462 Gene3D - 219 448 IPR023213 -
Vifa1g06104 462 Gene3D - 15 212 IPR023213 -
Vifa1g06104 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 39 412 - -
Vifa1g06104 462 Pfam Transferase family 17 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06104 Vifa-Chr1 954136227 954137615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06104 17 405 Monolignol Biosynthesis Gene Families AT5G48930 23.951 2.59e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06104 - - psat:127119885 867.455