Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g06091 | ATGATCATGGAACTCACCGAATCCTCCGCGGCTAACCTCAACAACCTCCCGCTTCTGCCGCCGCAGCAACCGCCGCACAACAACCTCCAAGATACTCGTTCAATCTTATGCATCGACCTAAACGAGATCCCTTCTCCTTCCTCCTCATTCCTTGAAACCCTACCTGACCTCACCATCGACATCGTTCGTACCTACCACGAAAATCCACCGCCACCTCCTGGTGGTCCCGCAGCTCTCCCCGGTGGTAGTACTTCATGCGCCGTCTGTGCTAAGCCCGGCGGAGGCGGAGATGGTAATTGCTTAGTCTGTGACGGCTGTGAGCGGAGTTTTCACTTGGCTTGCGCCGGGATTCGAGGTGGCGGTGGTCGGCAGGTTGCTGCGAGTCTAGGAGAGTGGGTTTGTGGTGAGTGTTCGGCTGGTGGTGTGAAGAGTAAACGGTGGCCGTTGGGTGTGAAGTCGAAGCAGCTTCTTGATATCAATGCTTCTCCGCCTAGTGATGTTGACGGAGAAGAGTTGCATGATGCGAGAAAGCACACGATGGGTGATAAATCTTTTGGTACCAATCAATTTGGTGATCCAGTGACATATTCAACCTTCTACAACGGGAGTGTGTTTGGCTTGCAAAGGGCATCTGGAGTTATGACACACGCTGTTAGAGTGGGTTTTGAGGATATATTGAATCACACCCAAGCAATGGCTAGAAGGTTTGAGGAAGTACCATCTCAAAGTCCAAATGAGTCAATTTTGCTGGCTCTTAGAGATTTTATATCTGAAAGGCATGGTGTACTGGAGGAAGGTTGGCGAGTGGAACTTAGACAATCAATGATCAGCCCTGACCTCTATGCAGTTTATTGTGCCCCCGATGGAAAGATATTTGATTCTGTGTATGAAGTAGCTAATTATCTGGGGCTACCGTCTGGCTACAATTCCATGGAATCTGAAATAAAAAACGAAATGTCTCTTTCTTTAGGTGGGCCTCACATATCCAGAAAACGGAAGTCTTCTAGAACTCTGACAGCCAATGGTTATGCAGAAAAGCAGGGAACCATGATCAATAGTAATTATAAGGATTGTTCTTCTGATGGTTTAATTATGGAATGTGCTAATGCTCAGGGGTCTATCCCAAAAGCCACTGAGATTGGAAGAAAAGAGAACAGTCACACTGACCCTGATCAATTCGCTGATGGACTTCCTCTGCAGTTTAAGGACTTCTATGTTCTTTCTTTGGGAAAAGTTGATGGGAGACCTTCATATTATGATGTTAACCTTACCTTTCCTGTGGGTTATGAGTCTTCCTGGCATGACAAGATTACTGGCTCTCTTTTTATGTGCCAAGTTTTGGATGGTGGTGATTCTGGACCTATATTTAGGATTAAAAGGTGTTCATGTTCAAAATTTCCTATTCCAGATGGGTCAACCATCCTTTCAATGCAAAGTCATTGTCAATTTGTAAGCGAAATCAATGAATTTCAGAGAGAGACTAATGCTAGTATGGATTTCGATGGTGACGAAAGTATCCAAATGATCCTTTTAGAACCTTGTGCCCCAACAGAAAATGACATCGTAAGTTGTGTTACCAGTTGCTCAAATGAAGCATATGCATCAGAAGGATTAAGGCCAGTTGCTGGTTCAGTTCAAGATAATATTGGAAATTCATTTGCTGATGATATGGATTTTGGTGATGAAATTGGTGAAGTTTTGGTTGAAGAGCGGTCCCCAATCTTTGCATGGAAACTTATTTCTCAAAAGTTAGTCAGTGCTTGCAAGGATATCTGCAAGAAGAAAGGAACTCTTAAATTATATTGTAAACATGTTGTAAGTGAAATGGGCTTACATAAATGGGATTTAAGGAATGGAAAAAGTGATACCCACTTCCCTTCGATGGATAAATTTTGTGGTTATCCTGGGTTTGTCAGTATTCCAAATACACTTTATGCAGACAGTGATCCGACAGGTCTCTATGAGCTGTTAGGAAAATGGTTGGAGCAGGATAGATTTGGATTGGATGTTGAATTTGTGCAAGAAGTATTGGAACAGCTTCCCGGTGTGCAGGATTCTTTGCAATATGAACTTTTGAGTAGTAGAACTAATAGCTCTTCATTACCAACAGTGGAAAATGGTTTCCTAGTGGTCGAATGTAAAGGTCAATCAAAATATCAAGATGAAGCAGCAGCTGTTCAAGGTTTATATAGAAGGCATAAGAAGGCAAGATTGACTGAAAGTTTTGTTAAGGAAGACCGATGTCCACCTCCTGGGAAACCACTGTGCTCTAGGGCTCCTACTGAACTCATTGGTGACATTTTTGAGGTTTGGGAGCATTTAGATCGATTTCATGAAATTCTAGACCTGAAAGAACCTTTGTTATTGGAGGAGCTTGAGAAGGAACTTATCAACCCATGGTTTGATGAATTAGAGTTCCCTGAGAAACTGGAGAGGGGAATGGGTAGAAATCAAGTTTCATATTCACAAGGGGGTAATGATGATTGCCGACTAATAAGTGAAGCTGGTCCATCAGGTTCCACAGAATGTTCTTTTATTCAAGTGGAAACAGAAGCTATGAAAGAGGAAGCCCAAGTGGCTGCTCTGGTGGATCCAAATTCTGAACCTGGAGAGACTCGGGGTAGACGAGGAAGAAGGAAAGATATAGATAGTGCAGTTCCTGCCAAACGAACTAAAGTCAATATGCTTCCTATTAATGAATTGACATGGCCAGAACTAGCTCGTAGATATATCTTGGCTTTCTTATCTATGGATGGTAACCTCGAGTCTGCAGAAATTACTGCCCGTGAAAGTGGTAAAGTATTTCGTTGCTTACGAGGTGATGGTGGTTTGCTGTGTGGGTCCCTTACTGGTGTGGCTGGAATGGAAATTGACGCACTGTTGCTTGCGGAGGCAACAGCAAAGATTTTTGGTTCCTTGAGCAGAGAAAATGATGTACTCATCATGGAAGAAAACGAGTCTGATGCGAAGGATGCTTCTGAGATGAAATTGGCGAATGATGGGAAAATTCCTGAATGGGCACAGGTGCTGGAACCTGTCAGAAAGCTACCAACAAATGTGGGAACCCGAATCAGAAAGTGTGTTAATGATGCTTTAGATAAGAATCCGCCAGATTGGGCGAAGAAAATACTGGAACACTCAATTAGTAAGGCCGTGTACAAGGGCAATGCATCTGGACCAACAAAGAAAGCAGTTCTTTCAGTGTTGAATGAGGTAACTAATGGAGTGCAGCTGAATACCAACAAGGAAAGGAAAAAGAAGATTGTTTTATCTATTTCTGACATTATTATGAAGCAATGCCGCATTGTATTACGCCGTGCAGCTGCGGCAGATGATTCAAAAGTTTTTTGCAATTTGTTGGGAAGAAAATTAGTAAATTCTTCTGATAACGACGACGAAGGGCTTCTTGGATCTCCAGCTATGGTGGCCCGGCCTCTTGATTTCCGAACTATTGATCTAAGATTGGCTTCTGGAGCTTATGATGGATCTCATGAAGCTTTTCTTGAGGATGTTCGTGAGTTGTGGAGCAATGTTCGTGTTGCTTTTGGGGATCAACCGGATTTAGTTGAACTTGCGGACAAATTATCCCAGAATTTTGAACTTTTATACGATGAGGAGGTTGTCACCTATGTCCAAAAGTTTGCAGAGTATGCTAAAGTGGGATGCTTAAGTGCAGAAATGAAAAAAGAAGTTGATGTTTTCATTGCATCAACAAATGATATTCCGAAGGCCCCTTGGGATGAGGGAGTTTGTAAAGTATGTGGCGTTGATAGGGACGATGACAGTGTTCTACTATGTGATACTTGTGATGCTGAGTATCATAAATATTGCTTGAATCCTCCACTTGTAAGGATCCCTGAAGGAAATTGGTACTGTCCATCTTGCATTGGTGGTAAACATTCAACACAAGATGTCACGGAACCTGCAAAGATTACTAGAAAACGTGGTAGTAAAAAATTCCAGGGAGAAGTTATCTGTCTTTATTTGGAAGCACTAACTCATTTATCGGCTGTAATGGAAGAAAAAGAATATTGGGAGTACAGTGTGGGAGAGAGAATGCTCCTTCTCAAGTTTTTATGTGGTGAGTTGCTCAGCTCTTCCCTGATACGACAGCATCTTGAGCAGTGTGCAGAGTCATCTGTTGAGTTACATCAGAAATTGCGTGCACTCTCTGTGGAGTGGAAAAACCTGAAAATTAAGGAAGATGTTTTATCCACAAAAGCTGCAAAATTTGAGTTACTGTCACAAAGTACCAATGGGGAAGTTGTTCTTAAGGACGGGTTCACATCCGTGTTCTCAAATACAAGTAAATGTCTTTTTAAGCCACATACTGCAACCTCCAATCCTAATGGTCTTGGGGTATTTGTTGACAGTCTACCTTCAGAAGAGATTCCTAAAGAGAAGTCTAGGTTCAATAGTGTTGATAAAAGCATATCCGTGACACATTCAGATTCTGATAGCCAAAATATGAATTCCATAGAAGGACAACTTAGGACTGTTCCTGTGGTTGTGGAGTCTCCTTGTACAGATAAATCCCCCAAGTATTTTCCATCCCCAAATCACATGCCCCAAGGAATAAATGGTTACAGTGGAGCAACTCATATTCAGGGTATACACCAGAAATGTGAGGTAAGGGATGTATCTACTTCTGCGTCATACCAGCAGCAGGGACAATGCGTGCCTGTTGAAATTTCCCAAAATGCCGTGAATGAGTTGGAACCATACCACCTCGAGCTCAATGCCATCAAGCATAATATTTCGCTATTGCAGGACTCTATAACTAGCATAGGATCACAGCTGTCAAAGGTCCCTGTTCGCCGGGAATTTTTAGGTATTGATTCCATTGGTCGACTATACTGGGCTTTGGGTACACCCAGTAAACGTTCACGTATAGTTGTTGATGCAAGTGCTGTTCTTCAGCATAGAAAAGGACTGTCAGCTAGCAAAGATTTTGTCGATAAATTTTCTGCTCGGCAGCATTGGGCATTATGTGAGAAGGATAACTATAAGATGTTAGGGCTGATGAAGGACTGCTCTTCTTTGAGTTCTTTACCACTTAATGCTTCAGGCAATAGTTCACCGTGGATTGCTTATGAAACAGATTCAGAAATCGAAGAGCTATTGGGTTGGTTAACAGATAATGATCCTAAAGAAAAAGAGCTGAGAGATTCGATTATGCTGGCGCCAAAACATAAACTTCAAGAGTTCGTTAATGCACACACTGAATGTCAGGTTGATGATCAAGTGCCAAGAAGTTCACCATCTAATTCTCTTGTTACAAAGGCCACTTCCTTGCTGGAAAAGAATTACAGTCCCTACTTTGAGTTGGATAATGCAGAGGTAGTGAAGGAGCAAAGTAAAAAGAACAGAACAACTACTGATGAAAAGTTGTGTAGGTGTGAATGCCTAGAACCCATATGGCCTTCTAGGAAACATTGTTTGTATTGCCACAAAACCTTTTTGACTGATGTTGAATTTGAGGTACACAATGATGGCAAATGTAGTGCAGAACTTCTGGCCTTGGAGAAGAATAAAGATAAAAATGGATCTTCTAAAGGAAGAGGGAACTTGAAATGTGATACCTCACATGAAAAATCCAGAGCTTATGCAGAAACAGCTGGAAACTCAATCAATAAATGTTCCAAGCTAAGTTTGAATTTGATTAAGTTTTCAAATGAAGGTTCCTCTTGCCCTTTTAATTTTGAAGCTGTATGCTCAAAGTTTGAGACAGATGATTCCAACAAGAAACTTGTCAGAGAAATTGGTCTGATTGGTTCAGATGGTGTGCCATCATTTATTCCTTCTGTATCTCCTTTTGTTAGTGATTTTACGCTATTCTTATCCCTAAAGGGCGACGGCATTGTTGGTGGTGCCTCTAATGTTTCAGAAAGCCGGGTTTCTCAGGAAAACACTGATGGTGCTGGCATATGCCACGAATCAGGAAAACCCACTCAGAGTTTAGCTGCAAATGAAAGCAATGAAACAGGAAAATCCAGTAAATTAGGAGAGCAAAGAGATGGAAAGTTATCTTTTTCTAATTCAGTTTCAGATATGGGAGTCTATGGCTGCTGCGTGGTTCCTTCGTCGTCTTTGAGACCACTAGTTGGTAAAGTTTCTCATATCTTGAGGCAACTAAAAATTAATCTACTTGATATGGATGCTGCACTTCCAGAAGTTGCTATAAGACCATCGAGGGCACAGTTGGACAGAAGACAGGCTTGGCGTGCATTTGTAAAATCTGCTCAGACTATATATGAGATGATTCAGGCAACAATTGCGCTGGAGGATATGATTAAGACGGAATTCTTAAGGAATGACTGGTGGTACTGGTCATCATTCTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCCCTTGCTCTTCGAATATACTCTCTTGATTCTGCCATTATGTATGAGAAAATGCCCAATTCAAGTTTAACTGACAGCTCCGATCCTCCTGCCGTAGCAGAACAGAAACTGGTGATCACCGTGGATTCAGATAAAACCAAAGCAAGCCGGAAGTCAAACAGGAAAAGAAAGGAATCAGATAGTTAA | 6555 | 0.42 | MIMELTESSAANLNNLPLLPPQQPPHNNLQDTRSILCIDLNEIPSPSSSFLETLPDLTIDIVRTYHENPPPPPGGPAALPGGSTSCAVCAKPGGGGDGNCLVCDGCERSFHLACAGIRGGGGRQVAASLGEWVCGECSAGGVKSKRWPLGVKSKQLLDINASPPSDVDGEELHDARKHTMGDKSFGTNQFGDPVTYSTFYNGSVFGLQRASGVMTHAVRVGFEDILNHTQAMARRFEEVPSQSPNESILLALRDFISERHGVLEEGWRVELRQSMISPDLYAVYCAPDGKIFDSVYEVANYLGLPSGYNSMESEIKNEMSLSLGGPHISRKRKSSRTLTANGYAEKQGTMINSNYKDCSSDGLIMECANAQGSIPKATEIGRKENSHTDPDQFADGLPLQFKDFYVLSLGKVDGRPSYYDVNLTFPVGYESSWHDKITGSLFMCQVLDGGDSGPIFRIKRCSCSKFPIPDGSTILSMQSHCQFVSEINEFQRETNASMDFDGDESIQMILLEPCAPTENDIVSCVTSCSNEAYASEGLRPVAGSVQDNIGNSFADDMDFGDEIGEVLVEERSPIFAWKLISQKLVSACKDICKKKGTLKLYCKHVVSEMGLHKWDLRNGKSDTHFPSMDKFCGYPGFVSIPNTLYADSDPTGLYELLGKWLEQDRFGLDVEFVQEVLEQLPGVQDSLQYELLSSRTNSSSLPTVENGFLVVECKGQSKYQDEAAAVQGLYRRHKKARLTESFVKEDRCPPPGKPLCSRAPTELIGDIFEVWEHLDRFHEILDLKEPLLLEELEKELINPWFDELEFPEKLERGMGRNQVSYSQGGNDDCRLISEAGPSGSTECSFIQVETEAMKEEAQVAALVDPNSEPGETRGRRGRRKDIDSAVPAKRTKVNMLPINELTWPELARRYILAFLSMDGNLESAEITARESGKVFRCLRGDGGLLCGSLTGVAGMEIDALLLAEATAKIFGSLSRENDVLIMEENESDAKDASEMKLANDGKIPEWAQVLEPVRKLPTNVGTRIRKCVNDALDKNPPDWAKKILEHSISKAVYKGNASGPTKKAVLSVLNEVTNGVQLNTNKERKKKIVLSISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLVNSSDNDDEGLLGSPAMVARPLDFRTIDLRLASGAYDGSHEAFLEDVRELWSNVRVAFGDQPDLVELADKLSQNFELLYDEEVVTYVQKFAEYAKVGCLSAEMKKEVDVFIASTNDIPKAPWDEGVCKVCGVDRDDDSVLLCDTCDAEYHKYCLNPPLVRIPEGNWYCPSCIGGKHSTQDVTEPAKITRKRGSKKFQGEVICLYLEALTHLSAVMEEKEYWEYSVGERMLLLKFLCGELLSSSLIRQHLEQCAESSVELHQKLRALSVEWKNLKIKEDVLSTKAAKFELLSQSTNGEVVLKDGFTSVFSNTSKCLFKPHTATSNPNGLGVFVDSLPSEEIPKEKSRFNSVDKSISVTHSDSDSQNMNSIEGQLRTVPVVVESPCTDKSPKYFPSPNHMPQGINGYSGATHIQGIHQKCEVRDVSTSASYQQQGQCVPVEISQNAVNELEPYHLELNAIKHNISLLQDSITSIGSQLSKVPVRREFLGIDSIGRLYWALGTPSKRSRIVVDASAVLQHRKGLSASKDFVDKFSARQHWALCEKDNYKMLGLMKDCSSLSSLPLNASGNSSPWIAYETDSEIEELLGWLTDNDPKEKELRDSIMLAPKHKLQEFVNAHTECQVDDQVPRSSPSNSLVTKATSLLEKNYSPYFELDNAEVVKEQSKKNRTTTDEKLCRCECLEPIWPSRKHCLYCHKTFLTDVEFEVHNDGKCSAELLALEKNKDKNGSSKGRGNLKCDTSHEKSRAYAETAGNSINKCSKLSLNLIKFSNEGSSCPFNFEAVCSKFETDDSNKKLVREIGLIGSDGVPSFIPSVSPFVSDFTLFLSLKGDGIVGGASNVSESRVSQENTDGAGICHESGKPTQSLAANESNETGKSSKLGEQRDGKLSFSNSVSDMGVYGCCVVPSSSLRPLVGKVSHILRQLKINLLDMDAALPEVAIRPSRAQLDRRQAWRAFVKSAQTIYEMIQATIALEDMIKTEFLRNDWWYWSSFSAAAKSSTLPSLALRIYSLDSAIMYEKMPNSSLTDSSDPPAVAEQKLVITVDSDKTKASRKSNRKRKESDS | 2184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g06091 | 2184 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 79 | 146 | IPR013083 | - | |
Vifa1g06091 | 2184 | CDD | PHD_SF | 85 | 137 | - | - | |
Vifa1g06091 | 2184 | Pfam | PHD-finger | 1250 | 1296 | IPR019787 | - | |
Vifa1g06091 | 2184 | Pfam | PHD-finger | 86 | 138 | IPR019787 | - | |
Vifa1g06091 | 2184 | ProSiteProfiles | FYR domain FYRN motif profile. | 396 | 449 | IPR003888 | GO:0005634 | |
Vifa1g06091 | 2184 | CDD | Bromodomain | 1086 | 1200 | - | - | |
Vifa1g06091 | 2184 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1236 | 1319 | IPR013083 | - | |
Vifa1g06091 | 2184 | SMART | PHD_3 | 1250 | 1296 | IPR001965 | - | |
Vifa1g06091 | 2184 | SMART | PHD_3 | 85 | 138 | IPR001965 | - | |
Vifa1g06091 | 2184 | ProSitePatterns | Zinc finger PHD-type signature. | 1251 | 1295 | IPR019786 | - | |
Vifa1g06091 | 2184 | PANTHER | OS02G0192300 PROTEIN | 22 | 2180 | - | - | |
Vifa1g06091 | 2184 | MobiDBLite | consensus disorder prediction | 2163 | 2184 | - | - | |
Vifa1g06091 | 2184 | ProSitePatterns | Zinc finger PHD-type signature. | 86 | 137 | IPR019786 | - | |
Vifa1g06091 | 2184 | Gene3D | - | 1092 | 1214 | IPR036427 | GO:0005515 | |
Vifa1g06091 | 2184 | SUPERFAMILY | FYVE/PHD zinc finger | 1235 | 1300 | IPR011011 | - | |
Vifa1g06091 | 2184 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 1330 | 1374 | IPR028942 | - | |
Vifa1g06091 | 2184 | ProSiteProfiles | Zinc finger PHD-type profile. | 83 | 140 | IPR019787 | - | |
Vifa1g06091 | 2184 | MobiDBLite | consensus disorder prediction | 865 | 884 | - | - | |
Vifa1g06091 | 2184 | MobiDBLite | consensus disorder prediction | 1983 | 1997 | - | - | |
Vifa1g06091 | 2184 | CDD | PHD1_Lid2p_like | 1250 | 1295 | - | - | |
Vifa1g06091 | 2184 | SUPERFAMILY | FYVE/PHD zinc finger | 84 | 148 | IPR011011 | - | |
Vifa1g06091 | 2184 | Gene3D | - | 397 | 506 | - | - | |
Vifa1g06091 | 2184 | Pfam | Methyl-CpG binding domain | 254 | 305 | IPR001739 | GO:0003677 | |
Vifa1g06091 | 2184 | SUPERFAMILY | Bromodomain | 1086 | 1205 | IPR036427 | GO:0005515 | |
Vifa1g06091 | 2184 | ProSiteProfiles | Zinc finger PHD-type profile. | 1248 | 1298 | IPR019787 | - | |
Vifa1g06091 | 2184 | MobiDBLite | consensus disorder prediction | 2143 | 2184 | - | - | |
Vifa1g06091 | 2184 | MobiDBLite | consensus disorder prediction | 1968 | 2006 | - | - | |
Vifa1g06091 | 2184 | MobiDBLite | consensus disorder prediction | 869 | 884 | - | - | |
Vifa1g06091 | 2184 | Pfam | Bromodomain | 1139 | 1193 | IPR001487 | GO:0005515 | |
Vifa1g06091 | 2184 | ProSiteProfiles | Bromodomain profile. | 1141 | 1189 | IPR001487 | GO:0005515 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g06091 | 30 | 2181 | C2H2 Transcription Factor Family | AT3G01460 | 44.464 | 0.0 | 1672 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Vifa1g06091 | Bromodomain | 2.1e-05 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g06091 | K22768 | - | gmx:100820223 | 2945.99 |