Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06083 ATGATCAAGTTTTCAACAAGCAAATTCTTGACCATATCTATAATTTTTCTTCTTCAACAAAGCTTAGTATGTTCAGAATGTAGCTGTGAAAATGAAGTACAAGATACTAATCATAAAGTATCTGAAGCATTGAAATACAAAATAATTGCTATGGCAACGGTTTTAGTTTCTAGCTTAATTGCCACCGGGTTCATACACATACTTCCCGATGCTTTCGAGGCCTTATCGAGTCCTTGTATAGGCGAAAAGCCATGGAAACTGTTCCCTTTCTCGAGTTTTGTTACAATGGTGACAGCCATTGGAACGTTGATTATGGAAGCTTTGATTATGGGATACAAAAAAAGATCTGAAGTGAAAAAATCTCAACCACTGGATGAGAATGATGAATCTCATGGAGCTGATGATACTAGTCATGTTCATAACATAACACTTGGATCAGATAAATTAGATACAACAAATCGTCTTCGCTATATCATAGTTTCTCAGATTTTGGAGCTAGGTATTGTGTTGCATTCAATCATTTTAGGGATATCTCTTGGTGTGTCAAGAAGTTCTAAAACAATCAAACCTTTAGTGGCAGTATTAACTATTCATCAATTCTTTGAAGGAATAGGACTTGGTGGCTGCATTTCTCAGGCACAATTCAAATATTCTAAGGTTGCTTTTATGATACTATTCTTTTGTCTAATTTTTCCAATTGGAATTGGCATTGGAATTGGAATATCAGACATCTACAATGAAAATAGTCCAAAGGCTTTAATAGTTGAAGGGCTTCTTCTATCAGCATCTGCAGGGGTTCTTATTAACATGGCACTTGTTGACCTTGTTGCTGCTGATTTCTTGAACTCAAAAATGCTAACAAGTTTAAGGCTACAACTTGGTGCAAGTTTAGCACTTTTTATAGGGTTGATTTGTATGTCAATTTTGGCATTGATGGAACATTCCTAG 948 0.3544 MIKFSTSKFLTISIIFLLQQSLVCSECSCENEVQDTNHKVSEALKYKIIAMATVLVSSLIATGFIHILPDAFEALSSPCIGEKPWKLFPFSSFVTMVTAIGTLIMEALIMGYKKRSEVKKSQPLDENDESHGADDTSHVHNITLGSDKLDTTNRLRYIIVSQILELGIVLHSIILGISLGVSRSSKTIKPLVAVLTIHQFFEGIGLGGCISQAQFKYSKVAFMILFFCLIFPIGIGIGIGISDIYNENSPKALIVEGLLLSASAGVLINMALVDLVAADFLNSKMLTSLRLQLGASLALFIGLICMSILALMEHS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06083 315 PANTHER ZINC/IRON TRANSPORTER 59 306 - -
Vifa1g06083 315 NCBIfam ZIP zinc/iron transport family 60 311 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vifa1g06083 315 Pfam ZIP Zinc transporter 56 310 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06083 Vifa-Chr1 949897383 949898829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06083 7 311 Inorganic Solute Cotransporters AT5G62160 41.954 2.98e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06083 K14709 - jre:108984890 331.643