Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa1g06076 | ATGGGATATGATTCTGATAGCCCCTCGCGAGATGAAGATGACGAAGAAGAATACGAGGAGTCTGGCAAGGGTAATGGGTTATTTGGGTTCATGTTTGGAAATGTTGATAACTCTGGTGATCTCGATGCTGATTATCTTGATGAGGATGCAAAGGAGCATCTCTCTGCATTGGCTGACAAGCTGGGACCATCACTGACAGATATAGATTTGTCAGGAAAGTCACCACATACACCACATGGCATTGTTGAACAAGACTGTGGTGAAAAGGCTGACAATGCTGTTGATTACGAAGATATTGATGAAGAATATGATGGTCCAGAGACTGAAACGGCAAATGAAGAGGACTATTTATTGCCAAAAAAGGAATTTTTCGCTGCCGAAGCCTCTCTTGAAGCTTTGGAACGCAAAACTTCCGTCTTCGATGATGAAAATTATGATGAAGAATCTGACAAGGAACAAGACTTAGAGAGTAATGATGCTAAAGTTGATAACATCTCTTTAGCTGTAGAGCAGGAGGAGAGCTTTGTAGATGCATCTAAAGGAGGGAGTGCTCTTGAGCATGATGTACAAGTTGGGTCTCCGCAGGCTGAAGAACTGGATACTGATGTTCAAATACCTGAGGAAGGACCCGAAGCTTTAAAAAGATCTATGGCTACACCGTTGCCTGTATTGTACGTGGACGATGGAAAAGTAGTTTTACGTTTCTCTGAAATCTTTGGTATTCAGGAACCTCCTCGAAAGGGAGAAAAGAAAGAGCGTCGGCATTCCACTCCTAGAGATAGATACAAGTCTTCGGATTTATCTGATGATATTGTAGAAGAGGATGAAGAGGAGTTCCTTAAAGGCTTCTCTCAGAGTCTCACACTCAGTAAACAGGTTTGTGTAATCGATACTGATGTATCAGAAAACGATAATGTTGACTTGGAATTTCCAAAGTTTGGATTTCTTCACGGAGATGCCTCACTTACTGCCAAAGATGACCGGCAACCAAAGGACTCTTGTCTTAGTGGTGAACCAATGAAAGGGGATTTCGCAGATGAACTTTCTTGGAAAGATCATCCCCTCATGTTGGCCAACTTTTATCCTCTTGACCAGCGAGACTGGGAAGATGAAATCCTTTGGGGCAACTCTCCTGTTGCAAGTGATAATGATAATAATATCTGTGAAATTTCTGGACCTGAATTGAGAGCTTCTGGTGATGGTGAAATAGAAATTGAAAGTGGGATACAAAATCTTCAGTCAGATCCCCATAAGATACTGGAGAAGAAGGATCATAATGTATTCATTTGCTGCTCTCCTGTTTCATTGGACCCCTTTGACTCAAGGGATTCTAATGGGGCTAAAACCAATTCAATGCCCGAAAGTCCATTTCATCCCCAACTTCTGAGGCTAGAAGTAGACAGTTCTCATCTTGCAGATGAAAGAGGGGCAGATATATCTGAGAATCATAATCAAAGTGGTCAAGTAAAGCGTTTGACCAAGGTTATGTCACAAAACAGAGATCTCATGGATGACTCATGGATAAACAAGATAATGTGGGAAGAGCTTGACAGGCCTAAGGTGAAACCAAAGCTTATATTTGATCTTCAGGATAATCAGATGCACTTCGAAGTTCTGGATAGCAAGGACGGTACCCATCTTCGCCTTCATGCTGGGGCTATGATCTTAGCCCGCTCTTTGAATTCCACTAACGCGGACTCTTCTGAGCTACCGGGACTTGGAGGTCAATATGGATGGAGACACGTTGCTAATGACAAACATTATTCAAATCGGAAAACTTCTCAGCAACTGAAATCAAACTCAAAAAAGCGCTCTGCTCACGGTGTCAAAATTTTTCACTCGCAACCTGCACTGAAACTGCAGACCATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCTAGAGCACTGTGGTATCCCCATGATAATGAGGTGGCTGTTAAAGAACAAGGAAAATTACCAACAAAAGGATCCATGAAAATTATTATGAAAAGCTTGGGTGGTAAGGGGTGTAAACTGCACGTCAATGCTGAAGAAACTATCTCTTCTGTTAAAGCAAAAGCTTCCAAAAAGCTAGATTTCAAGGCATCAGAAGCAGTGAAAATATTTTATTTGGGTGGGGAGCTTGAAGATCACATATCACTTATTGCACAAAATGTTCAGCCAAACTCCTTGTTACATCTTGTCCGTACAAAGATACATTTATGGCCTAGGGCACAAAGAGTTCCTGGTGAGGACAAGTCGTTGCGTCCTCCGGGAGCATTCAAGAAAAAATCTGATCTGTCTGTAAAAGATGGACATGTGTTTCTTATGGAGTATTGTGAAGAAAGGCCTTTACTTCTGAGCAATGTTGGAATGGGCGCAAGACTTTGCACATATTATCAAAAAAGTTCACCGGAAGACCAATCTGGGTCCTTATTACGCAACACAGATAGTAGCTTGGGGCATGTTATTTCTCTGGACCCTGCCGACAAATCTCCTTTTCTTGGTGATTTGAAACCTGGTAGCAGTCAGTCATCACTCGAGACCAATATGTATAGAGCACCCATATTTACTCATAAAGTTCCACCAAATGACTACCTGCTGGTTCGTTCTTCAAAGGGAAAGCTATCATTAAGGCGCATTGATAAAGTTAATGTTGTTGGACAGCAGGAGCCTCTCATGGAGGTGTTCTCGCCCGGAAGTAAGAATCTTCAGACTTTCATGATGAACAGGCTATTGGTACACATGTGCCGTGAGTTCCAAGCTGCAGAGAAGCAGCACTTGTCTCCATACATTCGCATTGACTACTTTCTTTCACAGTTTCCCTTCCTATCAGAAGCCTCATTTCGTAAGAGGATCAAGGAATATGCTAATTTACAGAGAGGTGCACATGGGCAATCCATTTTTGTTAAAAAGCGTAATTTCCGCATGTGGTCGGAGGATGAATTGAGAAAAATGGTGACACCAGAGCTTGTCTGTGCTTTTGAAAGCATGCAAGCTGGCCTCTACCGCTTAAAACATTTAGGAATTACTGAAACACATCCTAATAATATTTCGTCTGCAATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACACATTGAGAGGGAACTGCAAATTACTCCATGGAACTTGAGTAGCAATTTTGTTGCCTGTACAACTCAGGGTAAGGAAAATATTGAACGGATGGAAATTACTGGCGTTGGTGATCCATCAGGCCGCGGCTTGGGTTTTAGCTATGCTAGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAGTGGTGAAGAAAAAAGCAGCTGCTGGCAGGGGAGGTTCCACTGTTACTGGTACGGATGCTGATTTACGTAGATTAAGCATGGAGGCTGCACGAGAGGTACTTCTTAAATTCAATGTTCCTGAGGAAGTCATTGCAAAGCAAACCAGATGGCATCGCATTGCTATGATACGTAAACTATCAAGTGAGCAAGCTGCGTCTGGGGTTAAGGTTGATCCAACAACTATAGGAAAATATGCCCGTGGTCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGAGAGAAGTGCCAAGAGATTTGGGATAGGCAAGTTCAGAGTTTGGCAGCTTTAAATGGTGATGATAATGAGAGTGATTCAGAAGGAAATAGTGATCTAGATTCTTTTGCTGGAGATCTGGAAAATTTGCTTGATGCTGAGGAATTTGAAGAGGGAGAAGAAGGTACTAATGACTTAAAACGTGATAAGGGAGACGGTGTTAAGGGTCTTAAAATGAGAAGGCGCACAACTTTGGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCCGAGGCCACTGAATTATGCAGGCTGCTTATGGATGGTATGATATCTTATTGGTTATTGAAATATCATTCCATACCTTTATCGATGACGGAGCTTGCCGGAAGAAAAAGAAGAACACTGGGCACTGAACAAGTAAAGCAAATAACAAATGCAACATTGCAACTCGATGGAACTAATCATTTTAAGGAGGATGCAATTACAGATCTTAGGGAGGATGATAAATTTTCTTCTAAGAAAAGCAAATCAGTTAAGGTCAATAAAGCAAAGAAGAGTGACATTTCACCTATTAGTCTATCAAATAAAAAAATCAAACTAAATATGGGAGAAGGAATCAAGAACCAGGTATTTAAGGAGAAAAAACCATCAAGGGAAACTTTCGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGCGAACGAACAAGAATTGTCCGAAATATGGTGAAGATCTAGAAGCACAACTTGAACCTATGGACATGGAAAAATTAACTGGAAGATCCAGCTTTGTTGATTCTTCTAGCCAGTCTCAGCATAAACTCTCCTCCAAAAAGTCAATATCAAAGATTGTAACAAAAATGGCTCCAGTTGAGAATTCAACAAAAATTCCGTTGAAGTTCAAATGCAGTTCAACAGAGAAATCTTCTGATAGACCTGCAATAGAAACCCTGCAGAGTTCTGACAAGCCAGTCACTTCTGACTCAGAAACTGCTAAGTCTGCTAAGATTAGTAAGATAATTATTCCAAACAAAGTGAAATCAGAAGATACACAGGCTGAATCTCTTAAGCATGCTATTGTTATACGCCCTCCTACTGATCCAGGTAGAGGTCAGGTTGATTCTCATAAGTTCCCAATTAAAATCCGTCCGCCTGCAGAAATAGATAGGGAGCAAAGTCACAAAAAGATTGTTATAAAGCGTACAAAGGATGTTGCTGATCTGGAACTTGACAGTCCTGGTGGAAACACACGACTTGAAAACAGAAAAACTAAAAGAATTGTGGAATTGGCGAATTTTGAGAAGCACAGAAAGCAGGACACCATGTATTCAACTGAAAGTATGGTAAAATGGAATCCTAAAGAGGATAGAAGATGGTGGGAAGAACAAGAGAAACGAAGAAATGAAGTGAGACTTAGAGAAAAGAATGCAAAGAGGTATGGCACAGAAGAAAGGAAGATGCGCAAGGAACGAGAAAGGTTAGATGAGTTAAAAAGATATGAACAAGAAAGGTTAGATGAGTTAAAAAGATATGAAGAAGATATTAGAAGAGAGAGGGAAGAGGAAGAACGACAAAAAGCTAAGAAGAAAAAGAAAAAGAGAAAGCCCGATTTAAGAGATGAGTATTTAGACGATCCCAGGGAAAGAAGATATGGTAAGAGGATGCTAGAAAGAGAACGAAGTGGAAAACGGAGATCAGTTGTTGAGACAGGAAAGATTAGTGGAGATTTTCTGCCGCCAACTAAACGCCGAAGAGGGGGAGGAGGAGAGGTTGGTTTGGCAAATATCTTGGAGAGTATTGTGGATGCCATTGTGAAAGACAGGCACGATCTGTCTTATCTCTTTGTGAAACCAGTGCCCAAGAAAGAGGCCCCTGACTACCTGGATATCATAGAGACACCTATGGATCTTTCAAAAATCAGGCAACGGGTACGTAATATGGAGTACAAAAGTCGCGAAGACTTCAGACATGATGTATGGCAAATTACTTTTAATGCCCATAAATATAATGATGGACGAAATCCTGGAATCCCTCCAGTTGCGGATATGCTTTTGGAATATTGTGATTATTTGTTGAATGAGAATGATGATAATCTTACTGCCGCTGAAGCTGGCATTGAAATTAAAGATTTCTAA | 5676 | 0.4138 | MGYDSDSPSRDEDDEEEYEESGKGNGLFGFMFGNVDNSGDLDADYLDEDAKEHLSALADKLGPSLTDIDLSGKSPHTPHGIVEQDCGEKADNAVDYEDIDEEYDGPETETANEEDYLLPKKEFFAAEASLEALERKTSVFDDENYDEESDKEQDLESNDAKVDNISLAVEQEESFVDASKGGSALEHDVQVGSPQAEELDTDVQIPEEGPEALKRSMATPLPVLYVDDGKVVLRFSEIFGIQEPPRKGEKKERRHSTPRDRYKSSDLSDDIVEEDEEEFLKGFSQSLTLSKQVCVIDTDVSENDNVDLEFPKFGFLHGDASLTAKDDRQPKDSCLSGEPMKGDFADELSWKDHPLMLANFYPLDQRDWEDEILWGNSPVASDNDNNICEISGPELRASGDGEIEIESGIQNLQSDPHKILEKKDHNVFICCSPVSLDPFDSRDSNGAKTNSMPESPFHPQLLRLEVDSSHLADERGADISENHNQSGQVKRLTKVMSQNRDLMDDSWINKIMWEELDRPKVKPKLIFDLQDNQMHFEVLDSKDGTHLRLHAGAMILARSLNSTNADSSELPGLGGQYGWRHVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEVAVKEQGKLPTKGSMKIIMKSLGGKGCKLHVNAEETISSVKAKASKKLDFKASEAVKIFYLGGELEDHISLIAQNVQPNSLLHLVRTKIHLWPRAQRVPGEDKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKSSPEDQSGSLLRNTDSSLGHVISLDPADKSPFLGDLKPGSSQSSLETNMYRAPIFTHKVPPNDYLLVRSSKGKLSLRRIDKVNVVGQQEPLMEVFSPGSKNLQTFMMNRLLVHMCREFQAAEKQHLSPYIRIDYFLSQFPFLSEASFRKRIKEYANLQRGAHGQSIFVKKRNFRMWSEDELRKMVTPELVCAFESMQAGLYRLKHLGITETHPNNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTTQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLAALNGDDNESDSEGNSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRRTTLAQAEEEIEDEAAEATELCRLLMDGMISYWLLKYHSIPLSMTELAGRKRRTLGTEQVKQITNATLQLDGTNHFKEDAITDLREDDKFSSKKSKSVKVNKAKKSDISPISLSNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQLEPMDMEKLTGRSSFVDSSSQSQHKLSSKKSISKIVTKMAPVENSTKIPLKFKCSSTEKSSDRPAIETLQSSDKPVTSDSETAKSAKISKIIIPNKVKSEDTQAESLKHAIVIRPPTDPGRGQVDSHKFPIKIRPPAEIDREQSHKKIVIKRTKDVADLELDSPGGNTRLENRKTKRIVELANFEKHRKQDTMYSTESMVKWNPKEDRRWWEEQEKRRNEVRLREKNAKRYGTEERKMRKERERLDELKRYEQERLDELKRYEEDIRREREEEERQKAKKKKKKRKPDLRDEYLDDPRERRYGKRMLERERSGKRRSVVETGKISGDFLPPTKRRRGGGGEVGLANILESIVDAIVKDRHDLSYLFVKPVPKKEAPDYLDIIETPMDLSKIRQRVRNMEYKSREDFRHDVWQITFNAHKYNDGRNPGIPPVADMLLEYCDYLLNENDDNLTAAEAGIEIKDF | 1891 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa1g06076 | 1891 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Vifa1g06076 | 1891 | Gene3D | - | 645 | 735 | - | - | |
| Vifa1g06076 | 1891 | Coils | Coil | 1660 | 1715 | - | - | |
| Vifa1g06076 | 1891 | Pfam | Zinc knuckle | 1404 | 1427 | IPR041670 | - | |
| Vifa1g06076 | 1891 | MobiDBLite | consensus disorder prediction | 1716 | 1732 | - | - | |
| Vifa1g06076 | 1891 | SUPERFAMILY | Bromodomain | 1759 | 1878 | IPR036427 | GO:0005515 | |
| Vifa1g06076 | 1891 | FunFam | Transcription initiation factor TFIID subunit 1 | 645 | 735 | - | - | |
| Vifa1g06076 | 1891 | SMART | bromo_6 | 1766 | 1877 | IPR001487 | GO:0005515 | |
| Vifa1g06076 | 1891 | MobiDBLite | consensus disorder prediction | 68 | 89 | - | - | |
| Vifa1g06076 | 1891 | MobiDBLite | consensus disorder prediction | 173 | 203 | - | - |
Showing 1 to 10 of 35 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa1g06076 | K03125 | - | gmx:100780733 | 2884.36 |
Showing 1 to 1 of 1 entries