Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06072 ATGGATCTTGAGTCTGTTATCCACAAGAACCCAATTAAGGAGGAATCATGGAAGCATGTGTTGGTTTTGGCTTATCAAAGTTTAGGAGTTGTGTATGGAGATTTAAGCACTTCTCCACTTTATGTTTACAAAAGTGCTTTTGCTGAGGATATTAAACATTCGGACACAAACGAAGAAATCTTTGGTGTATTGTCTTTTGTGTTTTGGACACTGACTTTGATTCCACTTTTCAAGTATGTGTTCATTGTGTTGAGAGCTGATGATAATGGTGAAGGAGGGACTTTTGCTTTGTACTCTTTGCTATGTAGACATGCTCGTGTGAGTTTGATGCCTAATACTCAGCTTGCCGACGAGGATTTGACACAGTACACAATGGATGGAACTGCTGCAGTCAATAAGAGAAATGTTGGGTCTAGTTTGAAATCTTTGTTGGAGAAACATAGGGTGCTTCAAAGGGTGCTTCTTGTTCTTGCTTTGATTGGGACATGCATGGTTATTGGCGATGGTGTTCTCACACCAGCAATTTCTGTTTTTTCTGCTATTTCAGGTTTAGAGCTTTCCATGTCTAAAGAGCAGCACAAATATGTGGAGGTTCCGGTTGCTTGTATAATACTGATGTTTTTATTTGCGCTTCAACATTACGGAACTCATCGGATTGGATCTCTTTTCGCACCTGTTGTGTTGACGTGGCTGATATGCATCAGTTCTATTGGTATTTATAATATAATCCACTGGAATCCGCATGTTTACCAAGCTCTCTCCCCATACTACATGTTCAAATTTCTGAAAAAGACTCAATCGGGAGGTTGGATGTCGTTGGGAGGGATTCTATTGTGTATAACTGGCTCAGAAGCTATGTTTGCTGATTTAGGACACTTTTCGCAATTGTCTATTCAGATTGCTTTCACTTTCTTAGTTTACCCTTCTTTGATCTTAGCCTATATGGGACAAGCTGCATATCTTTCCAAGCATCATTCCCTTGAAACTGACTATAGAATCGGGTTTTATGTGTCTGTACCAGTAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGCCAAGCTATCATCACCGGAACTTTCTCGATAATCAAACAGTGTTCCTCTTTAGGATGCTTCCCGAAAGTCAAAATCGTCCATACATCATCCAAGATACATGGTCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTTCTTTGCCTGGCTGTTACAATTGGTTTTCGAGATACCAAACGCCTTGGAAACGCAGCAGGTTTGGCTGTGATAACTGTCATGCTGGTAACGACATGCCTGATGTCTCTGGTTATAGTCTTATGTTGGCACAAAAGTGCTTGGGTAGCTATTTGCTTTCTATTGTTCTTTGGTTCCATTGAAGCACTCTATTTCTCTGCCTCACTCATCAAGTTCCTTGAAGGCCCGACTCTCGGAATCGTAAGGGTTAAAGGTATTGGCCTAATACACACCGAGCTTGTAGCTGGGATCCCAGCTATCTTCTCTCATTTTGTTACCAATCTTCCTGCTTTTCACCAAGTTGTAATCTTTCTATGCATCAAATCCGTCCCGGTACCGCATGTTGCACCTCGAGAGAGATTCTTAGTTGGTAGAATTGGACCAAAGGAATATAGGCTTTATAGGTGCATAGCACGGTATGGCTACCGCGACGTTCATAAAGATGACATGGAGTTTGAAAATGATCTTATTTGCAGCATAGCAGAGTTTATCCGATCCGATATATCTGAATACAGCTCAGGGTTAGGAAGTTTCGAAGATGATACAAAGATGACCGTTGTCGGGACTTCGTCGTCAAACTCAGAAGGCGTAAAGATTTCGGAAGACAATCAAGATAATAATTCTCAAATAGAAGGAACTTCGTCGGAGTTGAAGGAAGTTAAGTCGCCGAAGAAAGTGAAGAAGAGAGTGAGGTTCGTTGTGCCGGATAGTCCACGGATGGACATGGATACAAGGGCAGAATTGGTTGAACTTATGGAAGCAAAGGAAGCAGGAATGGCATTCATAATGAGTCATTCATATGTGAGAGCAAAAAGAGGATCAAGTTGGATAAAAAAAGTTGTTATAAATTATGGTTATGATTTCTTAAGGAGAAACTCTAGAGGACCAGCTTATGCTTTAAGTTTACCTCATGCATCTACCTTAGAGGTAGGAATGATCTATCATGTATGA 2205 0.4086 MDLESVIHKNPIKEESWKHVLVLAYQSLGVVYGDLSTSPLYVYKSAFAEDIKHSDTNEEIFGVLSFVFWTLTLIPLFKYVFIVLRADDNGEGGTFALYSLLCRHARVSLMPNTQLADEDLTQYTMDGTAAVNKRNVGSSLKSLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAISGLELSMSKEQHKYVEVPVACIILMFLFALQHYGTHRIGSLFAPVVLTWLICISSIGIYNIIHWNPHVYQALSPYYMFKFLKKTQSGGWMSLGGILLCITGSEAMFADLGHFSQLSIQIAFTFLVYPSLILAYMGQAAYLSKHHSLETDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAIITGTFSIIKQCSSLGCFPKVKIVHTSSKIHGQIYIPEINWSLMLLCLAVTIGFRDTKRLGNAAGLAVITVMLVTTCLMSLVIVLCWHKSAWVAICFLLFFGSIEALYFSASLIKFLEGPTLGIVRVKGIGLIHTELVAGIPAIFSHFVTNLPAFHQVVIFLCIKSVPVPHVAPRERFLVGRIGPKEYRLYRCIARYGYRDVHKDDMEFENDLICSIAEFIRSDISEYSSGLGSFEDDTKMTVVGTSSSNSEGVKISEDNQDNNSQIEGTSSELKEVKSPKKVKKRVRFVVPDSPRMDMDTRAELVELMEAKEAGMAFIMSHSYVRAKRGSSWIKKVVINYGYDFLRRNSRGPAYALSLPHASTLEVGMIYHV 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06072 734 NCBIfam potassium uptake protein 23 485 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g06072 734 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 480 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g06072 734 MobiDBLite consensus disorder prediction 607 634 - -
Vifa1g06072 734 Pfam K+ potassium transporter 25 481 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g06072 734 Pfam K+ potassium transporter 486 562 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g06072 734 MobiDBLite consensus disorder prediction 607 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06072 Vifa-Chr1 948513091 948518258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06072 1 734 Inorganic Solute Cotransporters AT5G14880 71.919 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06072 K03549 - gmx:100793387 1258.43