Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06057 ATGAGAAGAAGATGGTCTTTCTACATGGATTTTCTACCAGTTGTGGTGATTATAAGCTTTGAATGTGTTGACATGGGTTTACTCACTTTGTTCAAAGCAGCAACACTTGAAGGAATGAACAACCATGTCTTTATTGCTTATGCTTATGTTGTTGGTACTTCTGTTCTCTTACCTGTCACTCTTTTCGCCAGAAGAGCAAGAGTGGTTCCTCCACTTACTTTCTCCATAATATGGAAAAGTGTGCTTCTTGGGGCAATAGGATGTGGATCTCAGATTCTGGGGTATATTGGTATTAACTATAGTTCTCCAACACTTTCTTCAGCAATTGCTAATCTAGTACCTGCTTTCACTTTCATGCTGGCTGTCATTTTCAGGATGGAAAAGTTAGTTTTAAAGAGTAGAAGTAGTAATGCGAAAGTAGTGGGAAGCATAATATCAATAGCAGTGGATTCAAGTTGGGCCATTGCTGGCATTATTCTAACAGTTGACTACTTTCTGCTTTCACTATGGTATATTTTACAGGTACATATCTTGAAAGAGTTCCCAGATGAAGTAACTTTAGTCTTGTTATACTCCACAACTGCAACAATCATATCAATAGTTGTAGCTTTGTTATCAGTTCCAAATGCAAGTGATTGGAAAATAGGACTAAATCTCTCACTCATCTCCATACTTTCTTCTGGAATATTTGGAAAGTTAATAGGCAATCTAATTTATGCCTGGTCAGTTCACTTAAAGGGGGCTGTCTATGTAACATCATTCATGCCACTCCAAATTGCTATTTCTGCTATCTTGGGAGTTATATTCCTTGGTGATACTCTTCATATTGGAAGTATAATTGGAGCCATAATCATCTCAATTGGCCTTTATGGTGTATTATGGGGCAAAACAAAAGAAGAGATAGAGGAAGATGTTGGTAGTCTGGAGTCATCATCTACATCTACAGAGAATGCACCTCTGTTGCAAAATTATGGAACTCAAAACTTTTGA 990 0.3737 MRRRWSFYMDFLPVVVIISFECVDMGLLTLFKAATLEGMNNHVFIAYAYVVGTSVLLPVTLFARRARVVPPLTFSIIWKSVLLGAIGCGSQILGYIGINYSSPTLSSAIANLVPAFTFMLAVIFRMEKLVLKSRSSNAKVVGSIISIAVDSSWAIAGIILTVDYFLLSLWYILQVHILKEFPDEVTLVLLYSTTATIISIVVALLSVPNASDWKIGLNLSLISILSSGIFGKLIGNLIYAWSVHLKGAVYVTSFMPLQIAISAILGVIFLGDTLHIGSIIGAIIISIGLYGVLWGKTKEEIEEDVGSLESSSTSTENAPLLQNYGTQNF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06057 329 MobiDBLite consensus disorder prediction 307 329 - -
Vifa1g06057 329 Pfam EamA-like transporter family 25 133 IPR000620 GO:0016020
Vifa1g06057 329 Pfam EamA-like transporter family 165 293 IPR000620 GO:0016020
Vifa1g06057 329 PANTHER WAT1-RELATED PROTEIN 12 309 IPR030184 GO:0016020|GO:0022857
Vifa1g06057 329 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 131 - -
Vifa1g06057 329 SUPERFAMILY Multidrug resistance efflux transporter EmrE 201 297 - -
Vifa1g06057 329 MobiDBLite consensus disorder prediction 305 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06057 Vifa-Chr1 946314305 946317661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06057 1 328 Nodulin-like Gene Family AT3G28050 43.597 9.52e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06057 - - tpra:123906528 497.278