Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06056 ATGACAAGAAGATGGTCTTTTTACATGGATTTTCTGCCAGTTGTTGTGATTATAGGCAATGAATTTATTGACATGGGTTTACTCACTTTGTTTAAAGCAGCAACACTTGAAGGAATGAACAATCATGTCTTTATTGCATATGCTTATGCTTTTGGTACTTCTTCTTCCTCTCACTCTTTTCACCAGAAGATCAAGAGTGGTTTCTCCTCCACTCAGTTTCTTCATAATATGCAAAAGTTTGCTTCTTGGGGCGATAGGATTTTGGGGTATATTAGTATTAATTATAGTTCTCCAACACTTGCTTCAGCAATTGCTAATTTGGTACCTGCTTTCACTTTCATGCTAGCTGTCACTTTCAGGATGGAAAAGTTAGCTATAAAGAGTAGAAGTAGTAATGCTAAGGTAATGGGAAGCATAATATCAATAGTAGGTGCTTTTGTATTGACTTTCTACAACGGACCATCAATCTGGAATTCCTCTTTACTTGATCAACCAAATGATTTTCTCAAGTCAGTGGATTCAACTTGGGCCATTGCTGGCATTCTGCTAATAGTGGACTATTTTCTGGTTTCTCTATGGTACATTTTACAGGTACATATCTTGAAAGAGTTCCCAGATGAAGTAACTTTAGTCTTGTTATACTCCACAACTGCAACAATCATATCAATAGTTGTAGCTTTGTTATCAGTTCCAAATGCAAGTGATTGGAAAATAGGACTAAATCTCTCACTCATCTCCATACTTTCTTCTGGAATTTTTGGAAAGCTTATAGGCAATATAGTTTCTGCATGGTCAATTCACTTAAAGGGAGCAGTTTATGTTACCTCATTCAAGCCACTTCAAATTGTTATTTCTGTTGCTTTGGGTGTTATATTCCTTAGTGATTCTCTTTATGTTGGAAGTATAATTGGAGCCACAATAATCTCAATTGGTCTTTATGGTGTATTATGGGGCAAAGCAAAAGAAGAGATAGAGGAAGATGTTGGTAGTTTGGAGTCACCTTCTACAGAGAATGCACATGCCCCTCTTTTGCAAAATTACTGA 1044 0.364 MTRRWSFYMDFLPVVVIIGNEFIDMGLLTLFKAATLEGMNNHVFIAYAYAFGTSSSSHSFHQKIKSGFSSTQFLHNMQKFASWGDRILGYISINYSSPTLASAIANLVPAFTFMLAVTFRMEKLAIKSRSSNAKVMGSIISIVGAFVLTFYNGPSIWNSSLLDQPNDFLKSVDSTWAIAGILLIVDYFLVSLWYILQVHILKEFPDEVTLVLLYSTTATIISIVVALLSVPNASDWKIGLNLSLISILSSGIFGKLIGNIVSAWSIHLKGAVYVTSFKPLQIVISVALGVIFLSDSLYVGSIIGATIISIGLYGVLWGKAKEEIEEDVGSLESPSTENAHAPLLQNY 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06056 347 PANTHER WAT1-RELATED PROTEIN 12 330 IPR030184 GO:0016020|GO:0022857
Vifa1g06056 347 Pfam EamA-like transporter family 181 316 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06056 Vifa-Chr1 946304054 946306293 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06056 1 347 Nodulin-like Gene Family AT3G28050 43.989 2.00e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06056 - - tpra:123906528 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06056 1 946304054 946306293 Vifa1g06056 1 946304054 946306293 ECH