Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06053 ATGATCTCTATTATCTGCACTGGAATATTTGGAAAATTCTTGAGTAGTGCAGTATATGCTTGGGCAATACACTTGAAGGGTCCTGTATATGCCACAATGTTCAAGCCACTTTCAATTGTTATTGTTGTTGTCATGGGAATTGTGTTCCTTGGTGATACTCTTCATATTGGAAGTTTAATTGGAGCCACAGTAATATCAATTGGACTTTATGCTGTAATGTGGGGCAAAGCAGCTGAAGAAAATGAGGATGGTTTTGGTAGCCAGGAATCAGCAACTATTGATAGTGTTCCTCTTTTGCAAAGTTATAAGACTGTAAAACTATAA 324 0.3704 MISIICTGIFGKFLSSAVYAWAIHLKGPVYATMFKPLSIVIVVVMGIVFLGDTLHIGSLIGATVISIGLYAVMWGKAAEENEDGFGSQESATIDSVPLLQSYKTVKL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06053 107 PANTHER WAT1-RELATED PROTEIN 2 87 IPR030184 GO:0016020|GO:0022857
Vifa1g06053 107 Pfam EamA-like transporter family 2 73 IPR000620 GO:0016020
Vifa1g06053 107 SUPERFAMILY Multidrug resistance efflux transporter EmrE 4 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06053 Vifa-Chr1 946248680 946249211 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06053 1 104 Nodulin-like Gene Family AT3G28050 49.138 3.94e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06053 - - gmx:100811686 157.918