Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06018 ATGAGACGCCTTAAATTGCTCATGCTATGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTTTATTGGGGTAAATACCCTTTCACTTGTTTGCCATCAAGTTTTCAAGCCTATCTTGTTGAACTGATCCTACCTCGTAGCAACATCGTGCAACTATGGAAGGGCACAAAGGTTCTACCTAATTTGACACATATTGATCTCTCTCACTCGAAAAATCTTATTAAGATGCCAAATTTTAAGGAGATTCCAAATCTCGAGAGCCTAGCTCTTGAAGGATGTATAAAACTAGTGAAGATTGATCCATCCATTGGTAGCTTAAGAAGGCTTTCCAAATTAGATTTGAAAAATTGTACAAATCTGTTTAATTGA 390 0.3615 MRRLKLLMLWNLNFSGSLNFLSSELGYLYWGKYPFTCLPSSFQAYLVELILPRSNIVQLWKGTKVLPNLTHIDLSHSKNLIKMPNFKEIPNLESLALEGCIKLVKIDPSIGSLRRLSKLDLKNCTNLFN 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06018 129 SUPERFAMILY L domain-like 2 127 - -
Vifa1g06018 129 Gene3D Ribonuclease Inhibitor 1 129 IPR032675 -
Vifa1g06018 129 Pfam Leucine Rich Repeat 45 64 IPR011713 -
Vifa1g06018 129 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 125 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06018 Vifa-Chr1 940474143 940475241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06018 16 127 WRKY Transcription Factor Family AT5G45050 38.053 1.16e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06018 - - psat:127106907 194.897