Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05997 ATGGCAGCAACAAAAACATCATCAACATCTACAACGTTGTTGCCATTGTTCTTCTTCTTCTTTTTCCTTAATCTCTCCGAATCTAGACTCACCTTAGACTACTACAAACAAACATGTCCGCAATTCGAACAAATCGTCCAACAAACAGTAACCTCAAAACAGATCCAATCCCCAACTACCGCCGCCGCCACCCTCCGTCTCTTCCTCCACGACTGCCTCCTCCCTAACGGCTGCGACGCCTCCGTCCTCCTCTCCTCCACCCCCTTCAACAAAGCCGAACGCGACAACGACATCAACCTCTCTCTCCCCGGCGACGCCTTCGACCTCATCGTACGCATCAAAACCGCCCTCGAATTCTCATGTCCCAACACCGTCTCTTGCTCCGACATCCTCGCCACCGCCACACGCGACCTCCTAATCATGCTCGGTGGTCCCCACTACAACGTCTACCTCGGCCGCCGCGACGGAACAACCTCCGCCTCACCCTCCGTCAACGGCCATCTCCCCAAACCATCAATGCCCATGTCACAAATCATCGACATCTTCACCAAACGCGGCTTCACCGTCGAAGAAATGGTAGCACTTTCCGGTGCTCACACTGTCGGATTCTCTCATTGTTCAGAATTCTCATCAGAAATATACAACCGTTCTTCATCTCCCAATTCTCCAAGTTCATACAATCCTCGTTTTGCTGAAGCGTTACGAACTGCTTGCCGTGATTATCAGAAGAATCCAACTTTATCGATTTTCAACGATGTGATGACACCGAACAAGTTCGATAATGTTTATTTTCAGAATCTTCCCAAAGGTTTAGGGGTTTTGAAATCGGATCATGGTTTGTTCATTGACCCATTAACGAAACCGTTTGTGGAAAGATTTGCTGCGGATGAAGATAGATTCTTTAAGGTTTTTGCTAGCTCAATGCAGAAGCTTAGTCTTTTGGGTGTTAAAACTGGTAGAAGAGGTGAAATTAGAAGAAGATGTGATCAGATTAATTGA 999 0.4755 MAATKTSSTSTTLLPLFFFFFFLNLSESRLTLDYYKQTCPQFEQIVQQTVTSKQIQSPTTAAATLRLFLHDCLLPNGCDASVLLSSTPFNKAERDNDINLSLPGDAFDLIVRIKTALEFSCPNTVSCSDILATATRDLLIMLGGPHYNVYLGRRDGTTSASPSVNGHLPKPSMPMSQIIDIFTKRGFTVEEMVALSGAHTVGFSHCSEFSSEIYNRSSSPNSPSSYNPRFAEALRTACRDYQKNPTLSIFNDVMTPNKFDNVYFQNLPKGLGVLKSDHGLFIDPLTKPFVERFAADEDRFFKVFASSMQKLSLLGVKTGRRGEIRRRCDQIN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05997 332 ProSiteProfiles Plant heme peroxidase family profile. 29 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 FunFam Peroxidase 169 311 - -
Vifa1g05997 332 PANTHER - 16 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 Gene3D Peroxidase, domain 2 169 311 - -
Vifa1g05997 332 FunFam Peroxidase 33 177 - -
Vifa1g05997 332 Pfam Peroxidase 49 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 CDD secretory_peroxidase 30 331 IPR033905 GO:0004601|GO:0042744
Vifa1g05997 332 Gene3D - 33 332 - -
Vifa1g05997 332 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 SUPERFAMILY Heme-dependent peroxidases 30 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g05997 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05997 Vifa-Chr1 938389164 938390162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05997 26 332 Peroxidase AT5G40150 65.147 7.47e-154 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05997 K00430 - gmx:100798144 476.863