Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05973 ATGGCAGCTTGCACTGTCTACTCAACACAATCTCTAAGAACAAACATCTCAATCCCAACATCATCAAAAACAAACGTTGGATTCCATCAAAAACAAGTAGTTTTCTTCACAACAAACAAGAGCCACAACAACAGAAGAACAAACAGCAACAAAAGATACTTGATAACATGTGGAGCAGGTGACTCACAGACAATTGTGATAGGTCTAGCAGCTGATTCAGGTTGTGGAAAAAGCACTTTCATGAGAAGACTCACAAGTGTTTTTGGAGGAGCAGCAGAACCACCAAAAGATGCTCCTGAGCTTATTAAACCTCCCAAAATCTTAGTCATTGAAGGTCTTCATCCAATGTATGATTCTAGAGTTAGAGAACTCTTGGACTTCAGTATTTACTTAGACATTAGTAATGAGGTGAAGTTTGCTTGGAAAATTCAGAGAGACATGGCAGAACGGGGACACAGTCTTGAAAGTATCAAGGCTAGCATTGAAGCTAGAAAGCCTGATTTTGAAGCTTATATTGATCCACAAAAGCAATTCGCAGATGCAGTGATAGAAGTGTTACCAACCCAACTCATCCCCGATGATAACGAGGGAAAGATTTTACGAGTAAGGTTGATACAGAAAGAGGGTGTGAAATACTTTAGCCCAGTTTACTTGTTCGACGAAGGTTCAACCATTTCATGGATACCATGTGGAAGAAAACTCACATGCTCTTACCCCGGAATCAAATTTTTCTATGGACCAGAAACTTACAAAGGAAACGAGGTGTCAGTTGTGGAAATGGATGGACAATTTGACAGATTAGATGAACTAATATATGTTGAGAGCCATTTAAGCAACTTATCATCCAAATTCTATGGAGAAGTTACTCAACAAATGTTGAAGCATGCTGATTTTCCTGGTAGCAACAATGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTGTTTGAGCAGATAGTAGCAAGCAGGGCTGAGACTCCCGTAGGAGCTGCTAAAGCTTAG 1014 0.3984 MAACTVYSTQSLRTNISIPTSSKTNVGFHQKQVVFFTTNKSHNNRRTNSNKRYLITCGAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKDAPELIKPPKILVIEGLHPMYDSRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQFADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAAKA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05973 337 ProSitePatterns Phosphoribulokinase signature. 142 155 IPR006082 GO:0005524|GO:0005975|GO:0008974
Vifa1g05973 337 PANTHER URIDINE KINASE 102 226 - -
Vifa1g05973 337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 261 IPR027417 -
Vifa1g05973 337 Pfam Phosphoribulokinase / Uridine kinase family 66 96 IPR006083 GO:0005524|GO:0016301
Vifa1g05973 337 Pfam Phosphoribulokinase / Uridine kinase family 99 191 IPR006083 GO:0005524|GO:0016301
Vifa1g05973 337 Gene3D - 94 218 IPR027417 -
Vifa1g05973 337 Gene3D - 61 93 IPR027417 -
Vifa1g05973 337 CDD PRK 66 281 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05973 102 219 PRT Gene Family AT3G27440 27.731 3.16e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05973 K00855 - nnu:104611432 481.87