Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05964 ATGGATTTCGTTTTTGATTCCCTAACTGCTTGTGCCATTGCGGTAGCATTATTTTCTATATTTTTCTTTTACTATTTGTTTCTTCATAGTTCCTCCAAAGAGGCTCCTATAGTTCAAGGAGCATGGCCAATAATTGGTCACCTCCCACTATTGAGGCCTTCCAAAGGAATACCTCATAGAATCTTAGGTGAATTGGCCAACAAATATGGACCCTTATTTACCATTAAGCTTGGTGCCAAACGTGCTTTGGTTCTAAGTAATTGGGAAATAGCAAAGGAATGTTTCACCAAATTTGATATAGAAGTTTCCACTCGCCCTAAACTTGAAGCAACTCAACATATGGCTTACAATGGAGCCATGTTTACTTTAGCACCCTATGGTCCTTATTGGCGCGAAGCGCGTAGGATTACAACTTTAGAGATCCTCAGCATTCGACGTTTAGGGCAACTAGAACATTTCCGTGTTAGGGAAGTTCGAAGATCGATTAAAGAGCTCTACAATGTTTGGTGTAGTAAAGAAAACAACAATTCATCAAACTATATGATGGTGGAGATGAAGCAATGGTTTGCTCAATTGAGTTCAAACATCGTTCTTCCAATGTTGGTTGGAAAGAGGTATTTCGGTGCTACAAGTGTGTTAGATAAGGAAAAAGCACAAAAGTATATTCATAATATGAAAGAGATGCTGCATTTGGTAGGAGTATTCACAGTTGGAGATGCTATTCCTTTTCTAAAATAG 738 0.3848 MDFVFDSLTACAIAVALFSIFFFYYLFLHSSSKEAPIVQGAWPIIGHLPLLRPSKGIPHRILGELANKYGPLFTIKLGAKRALVLSNWEIAKECFTKFDIEVSTRPKLEATQHMAYNGAMFTLAPYGPYWREARRITTLEILSIRRLGQLEHFRVREVRRSIKELYNVWCSKENNNSSNYMMVEMKQWFAQLSSNIVLPMLVGKRYFGATSVLDKEKAQKYIHNMKEMLHLVGVFTVGDAIPFLK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05964 245 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05964 245 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05964 245 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05964 245 Gene3D Cytochrome P450 29 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05964 245 PANTHER CYTOCHROME P450 82C3-RELATED 17 245 - -
Vifa1g05964 245 Pfam Cytochrome P450 40 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05964 245 SUPERFAMILY Cytochrome P450 25 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05964 Vifa-Chr1 932941295 932942032 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05964 7 244 Cytochrome P450 AT4G31940 39.419 7.50e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05964 - - gmx:100803451 290.426