LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g05964	ATGGATTTCGTTTTTGATTCCCTAACTGCTTGTGCCATTGCGGTAGCATTATTTTCTATATTTTTCTTTTACTATTTGTTTCTTCATAGTTCCTCCAAAGAGGCTCCTATAGTTCAAGGAGCATGGCCAATAATTGGTCACCTCCCACTATTGAGGCCTTCCAAAGGAATACCTCATAGAATCTTAGGTGAATTGGCCAACAAATATGGACCCTTATTTACCATTAAGCTTGGTGCCAAACGTGCTTTGGTTCTAAGTAATTGGGAAATAGCAAAGGAATGTTTCACCAAATTTGATATAGAAGTTTCCACTCGCCCTAAACTTGAAGCAACTCAACATATGGCTTACAATGGAGCCATGTTTACTTTAGCACCCTATGGTCCTTATTGGCGCGAAGCGCGTAGGATTACAACTTTAGAGATCCTCAGCATTCGACGTTTAGGGCAACTAGAACATTTCCGTGTTAGGGAAGTTCGAAGATCGATTAAAGAGCTCTACAATGTTTGGTGTAGTAAAGAAAACAACAATTCATCAAACTATATGATGGTGGAGATGAAGCAATGGTTTGCTCAATTGAGTTCAAACATCGTTCTTCCAATGTTGGTTGGAAAGAGGTATTTCGGTGCTACAAGTGTGTTAGATAAGGAAAAAGCACAAAAGTATATTCATAATATGAAAGAGATGCTGCATTTGGTAGGAGTATTCACAGTTGGAGATGCTATTCCTTTTCTAAAATAG	738	0.3848	MDFVFDSLTACAIAVALFSIFFFYYLFLHSSSKEAPIVQGAWPIIGHLPLLRPSKGIPHRILGELANKYGPLFTIKLGAKRALVLSNWEIAKECFTKFDIEVSTRPKLEATQHMAYNGAMFTLAPYGPYWREARRITTLEILSIRRLGQLEHFRVREVRRSIKELYNVWCSKENNNSSNYMMVEMKQWFAQLSSNIVLPMLVGKRYFGATSVLDKEKAQKYIHNMKEMLHLVGVFTVGDAIPFLK	245

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g05964	245	PRINTS	E-class P450 group I signature	192	210	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa1g05964	245	PRINTS	E-class P450 group I signature	66	85	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa1g05964	245	PRINTS	E-class P450 group I signature	90	111	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa1g05964	245	Gene3D	Cytochrome P450	29	245	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa1g05964	245	PANTHER	CYTOCHROME P450 82C3-RELATED	17	245	-	-
	Vifa1g05964	245	Pfam	Cytochrome P450	40	241	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vifa1g05964	245	SUPERFAMILY	Cytochrome P450	25	244	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g05964	Vifa-Chr1	932941295	932942032	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g05964	7	244	Cytochrome P450	AT4G31940	39.419	7.50e-60	195

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g05964	-		-	gmx:100803451	290.426

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