Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05895 ATGCTTGAAAGTGTTATTGGTATTGATCCTCTCAATAACAGGCTACCAGCAGAGCCCCCCTTAGAGCCATACGAAGGACTGGAGTTTTCATCAATCGAAGAGGCGAGAATTTACTACACAAGGTATGCTAAGAACAAAGGTTTTAGCTTTCGTATGGGCCGTGTTACTAAATCAAGAACAAATAACATGATAATAGGTCGAGAATTTCTTTGTTCAAAGGAGGAATTTCAGGCAAAAAAATATGTGAAAGAGGAAAGTAATAATATTATTGTACACGATGAAACAAGGGTAGGATGTAAGGCAATGCTATATATAAAGGAAAAAAATGGAGAAATATGGGTTGTTTCAAGATTTGTAAGGGACCATAATCATGAACTATTTTCTCTTAAAAGTTCACAGTTTCTTCGAGTACATAGAAAGAAGAGTAAAGTGCAAAAGAAACTTATTGGTGCTGCATGA 459 0.3573 MLESVIGIDPLNNRLPAEPPLEPYEGLEFSSIEEARIYYTRYAKNKGFSFRMGRVTKSRTNNMIIGREFLCSKEEFQAKKYVKEESNNIIVHDETRVGCKAMLYIKEKNGEIWVVSRFVRDHNHELFSLKSSQFLRVHRKKSKVQKKLIGAA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05895 152 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 147 - -
Vifa1g05895 152 Pfam FAR1 DNA-binding domain 38 127 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05895 Vifa-Chr1 923262997 923263455 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa1g05895 FAR1 2.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05895 - - psat:127129645 263.077