Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05877 ATGCTAGCACCATCACCTACTCCCCAAGTTTCACCTCTGCCTGTGCCAGTACCTTCACCAATCTATCAAACTGTACAGCCTCCATCTGGCCCTTCACAACAACAATACAGTGTCCTGGTCGCGAGGCCACCTGTGCTGCATGGCTCGTTTGTCCAGGGTCCATACGGGCCTTTGGTAGTGTCCCCCACCATGGTACCTTTTCAAGGCTGGAGCTCTTATCATCAGGCTCAGGCTGCAAGTCCTGTGCTTCCTACGAGTACTCCGTTGAGCATTGCTTCGCCACATATTTATGGGATAACTCAGCTACCTTCACCGACTACTGCCTTTACTGGACTTTTTCAACCTTCTGGTTCCTCAACTGGTCCTTCAGGCAGTAGTCAGAAGGAACAGTCATTACCCGAAAGGCCTGATCAGCAGGAATGTCATTGTTGTACCCCAAAATTTGCCCTCCCATATCCTTCAAAATTTCAAAATTCCCCAAGGGTTGCACAATTCAAGGGCCTCCTAAACAATCAAAAATAG 522 0.4904 MLAPSPTPQVSPLPVPVPSPIYQTVQPPSGPSQQQYSVLVARPPVLHGSFVQGPYGPLVVSPTMVPFQGWSSYHQAQAASPVLPTSTPLSIASPHIYGITQLPSPTTAFTGLFQPSGSSTGPSGSSQKEQSLPERPDQQECHCCTPKFALPYPSKFQNSPRVAQFKGLLNNQK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05877 173 MobiDBLite consensus disorder prediction 110 139 - -
Vifa1g05877 173 MobiDBLite consensus disorder prediction 110 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05877 Vifa-Chr1 920877358 920877961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05877 21 161 C2H2 Transcription Factor Family AT5G18550 39.310 3.36e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05877 - - mtr:11409008 194.126